PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022931507.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 326aa    MW: 35958 Da    PI: 6.8663
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022931507.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B394.66.8e-3033134199
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                     f+kv tpsdv+k++rlv+pk++ae++    ++++e++  l++ed+ g+ W+++++y+ +s++yv+tkGW++Fvk+++L++gD+v F++ g  + +
  XP_022931507.1  33 FDKVVTPSDVGKLNRLVIPKQHAEKFfpldSSSTEKGLLLSFEDRCGKLWRFRYSYWTSSQSYVMTKGWSRFVKEKRLDAGDIVSFQR-GVCKDR 126
                     89***************************988889999*************************************************4.347777 PP

                     .EEEEE-S CS
              B3  92 lvvkvfrk 99 
                     +++ ++r+
  XP_022931507.1 127 FFIDWRRR 134
                     89999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MDFGSSSRFH HQHQEIMEES SNSGVYIEKE HMFDKVVTPS DVGKLNRLVI PKQHAEKFFP  60
LDSSSTEKGL LLSFEDRCGK LWRFRYSYWT SSQSYVMTKG WSRFVKEKRL DAGDIVSFQR  120
GVCKDRFFID WRRRPPHTAV ETAFHHHGGG GCGGGGGGYG GGGQFPPYQF QLHGQWNPVA  180
TPLSLHRDHA FHLQQNNSVH NNVSLFHTTY NHQPIGGGGC DGGASVFYEL RSPAALPGVD  240
DGGGHGIGKA AAAKTLRLFG VNMECVVSED SDDDEGDKVT TSTSTTLSSQ FCVYNGMPMS  300
MSMPTSNPDV PITDFFEKGK SLDFGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61970.13e-61B3 family protein