PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022931345.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

FAR1

Protein Properties

Length: 847aa MW: 97521.2 Da PI: 7.0616

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022931345.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.4	8.9e-27	89	191	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk............tekerrtraetrtgCkaklkvkkekdgkwevtklel 83 +fY+eYA+++GF++ +++s++sk+++e+++++f Cs++g ++e +k+ +e++ +ra +t+Cka+++vk++ dgkw+++++++ XP_022931345.1 89 SFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGMKREYDKSfnrprvrqtkqeSENSTGRRACAKTDCKASMHVKRRADGKWVIHSFVK 183 5*****************************************999*99976555555559999********************** PP FAR1 84 eHnHelap 91 eHnHel p XP_022931345.1 184 EHNHELLP 191 ***975 PP

Sequence ? help Back to Top
Protein Sequence Length: 847 aa Download sequence
MDIDLRLPSG EHDKDEEPNG INNMLDVEEK LHNGVIESGN NMVDATDGMH VEDGGDLNSP 60 MLDMVMFKED TNLEPLPGME FESHSEAYSF YQEYARSMGF NTAIQNSRRS KTSREFIDAK 120 FACSRYGMKR EYDKSFNRPR VRQTKQESEN STGRRACAKT DCKASMHVKR RADGKWVIHS 180 FVKEHNHELL PAQAVSEQTR KMYAAMARQF AEYKNVVGLK NDSKNPFDKV RNFAFDAGDA 240 RILLDFLTQM QNLNSNFFYA VDIGEDHRLR NLFWIDAKSR HDYIYFNDVV SLDTTYIRNK 300 YKLPLAFFVG VNQHYQFMLL GCALLSDESP TTYAWLLHVW LKAIGGQAPK VIITDHDKVL 360 KSVIQEVLPN VYHHFTLWHI LAKISENLGN VTKRHENFMA KFEKCIYRSW TTEEFEKRWW 420 KLVDRFELRE DELVQSLCED QRQWAPTYMK DVFLAGMSVA QRSESVNSFL DKYLHKKTTV 480 QEFVKQYESI LQDRYEEEAK ADSDTWNKQP TLRSPSPFEK SISGMYTHAV FKKFQVEVLG 540 AVACFPRKEK EDEKSITYHV QDFEKNLVFI VVWNGLKSEV SCLCRLYEYK GYLCRHAMVV 600 LQKCELSTIP TQYILKRWTR DAKSRHLLGE EPELVQSRVQ RYNDLCQRAL RLIEEGSLSQ 660 ESYSVAAHAL DETLGNCIGV NNSNRTFLEA GPSAAHSLLC IEEDSQIRNI GKTNKKKNPT 720 KKRKVNSEPD VMTVGAHDNL QHMDKLSSRA VTLDGYFGAQ PSVQGMVQLN LMAPTRDNYY 780 GNQQAIQGLG QLNSIAPSHD GYYPAQPSIH GLGQMDFFRA PAGFAYGIRD DPNVRTTQLH 840 DDASRHA

Sequence ? help Back to Top

Protein Sequence Length: 847 aa Download sequence

MDIDLRLPSG EHDKDEEPNG INNMLDVEEK LHNGVIESGN NMVDATDGMH VEDGGDLNSP  60
MLDMVMFKED TNLEPLPGME FESHSEAYSF YQEYARSMGF NTAIQNSRRS KTSREFIDAK  120
FACSRYGMKR EYDKSFNRPR VRQTKQESEN STGRRACAKT DCKASMHVKR RADGKWVIHS  180
FVKEHNHELL PAQAVSEQTR KMYAAMARQF AEYKNVVGLK NDSKNPFDKV RNFAFDAGDA  240
RILLDFLTQM QNLNSNFFYA VDIGEDHRLR NLFWIDAKSR HDYIYFNDVV SLDTTYIRNK  300
YKLPLAFFVG VNQHYQFMLL GCALLSDESP TTYAWLLHVW LKAIGGQAPK VIITDHDKVL  360
KSVIQEVLPN VYHHFTLWHI LAKISENLGN VTKRHENFMA KFEKCIYRSW TTEEFEKRWW  420
KLVDRFELRE DELVQSLCED QRQWAPTYMK DVFLAGMSVA QRSESVNSFL DKYLHKKTTV  480
QEFVKQYESI LQDRYEEEAK ADSDTWNKQP TLRSPSPFEK SISGMYTHAV FKKFQVEVLG  540
AVACFPRKEK EDEKSITYHV QDFEKNLVFI VVWNGLKSEV SCLCRLYEYK GYLCRHAMVV  600
LQKCELSTIP TQYILKRWTR DAKSRHLLGE EPELVQSRVQ RYNDLCQRAL RLIEEGSLSQ  660
ESYSVAAHAL DETLGNCIGV NNSNRTFLEA GPSAAHSLLC IEEDSQIRNI GKTNKKKNPT  720
KKRKVNSEPD VMTVGAHDNL QHMDKLSSRA VTLDGYFGAQ PSVQGMVQLN LMAPTRDNYY  780
GNQQAIQGLG QLNSIAPSHD GYYPAQPSIH GLGQMDFFRA PAGFAYGIRD DPNVRTTQLH  840
DDASRHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	0.0	FAR1 family protein