PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022931180.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 166aa MW: 18631.8 Da PI: 8.6954 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.3 | 2.8e-05 | 43 | 65 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F++ L H+++H XP_022931180.1 43 YTCNFCRREFKSAQALGGHMNVH 65 9********************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence |
MEGGKHRSMS NGKVVKNEEQ QWGFGKQETF SSDQFLHWPA RKYTCNFCRR EFKSAQALGG 60 HMNVHRRDRG RLRYWSSWMH NNSYPTPSFC LPPPPPSCFS SRPSIENSSL TCIEGSGSCS 120 RSNEGDGDAD VDGVKKKRKK GSVNLEGKMG NLVGCSSEDL DLELHL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 136 | 140 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42410.1 | 4e-20 | C2H2 family protein |