PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022931035.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

G2-like

Protein Properties

Length: 539aa MW: 60619.4 Da PI: 5.8547

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022931035.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	88	8.6e-28	303	356	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k++++W+peLH++F++aveqL G+++A+P++ilelmkv+gLt+++v+SHLQkYR+ XP_022931035.1 303 KTKVDWSPELHRKFIQAVEQL-GIDRAIPSKILELMKVEGLTRHNVASHLQKYRM 356 6799***************.******************************8 PP
2	Myb_DNA-binding	42.2	1.9e-13	306	355	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W++e++ ++++av+qlG + +++I + m +g+t+ ++ s++qky+ XP_022931035.1 306 VDWSPELHRKFIQAVEQLGIDraIPSKILELMKvEGLTRHNVASHLQKYR 355 57***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 539 aa Download sequence
MVCTADDLQE WKDFPKGLRV LLLDRDSRSA TEISAKLEEM EHVVYYCNDE KEALSAIMNT 60 PENFHIAILE MCKGNYGESF KLLGSSKDLP IIMTSDVYCL TTMMKCIALG AVEFLLKPLS 120 EDKLRNIWQH VLHKAFSSTP KPEVDSAASL MQLQLESEDN NGVLKDTEGL SWIQDIVWEQ 180 EQPDGSVKSQ LNQGSSLQGF WESGDQMNCP METDCSDKHV QSNFVETTSH DLVCEDTLQE 240 GQPQLSGKVM DKEDENFAVG LNAESNVYQH LQNKYGVKSS PSAAEQSIQG SDVNPSASSK 300 AKKTKVDWSP ELHRKFIQAV EQLGIDRAIP SKILELMKVE GLTRHNVASH LQKYRMQKKH 360 AVHREENPRF SMLTNHLKPN MAYPSYYPYC GISMSTVYRT WTQNNGQPAN VNMWGPPDYR 420 HWPQPGTQPW NSYAGMQADA WGCPVMLPSR APYFSYPQQI SSSHNVYTAN KSCYGTPHSS 480 FDLQPDEELI DKIVTEARRK PWSPLPLGLK PPSAESVLKE LSKQGVSTVP PRINGSKPP

Sequence ? help Back to Top

Protein Sequence Length: 539 aa Download sequence

MVCTADDLQE WKDFPKGLRV LLLDRDSRSA TEISAKLEEM EHVVYYCNDE KEALSAIMNT  60
PENFHIAILE MCKGNYGESF KLLGSSKDLP IIMTSDVYCL TTMMKCIALG AVEFLLKPLS  120
EDKLRNIWQH VLHKAFSSTP KPEVDSAASL MQLQLESEDN NGVLKDTEGL SWIQDIVWEQ  180
EQPDGSVKSQ LNQGSSLQGF WESGDQMNCP METDCSDKHV QSNFVETTSH DLVCEDTLQE  240
GQPQLSGKVM DKEDENFAVG LNAESNVYQH LQNKYGVKSS PSAAEQSIQG SDVNPSASSK  300
AKKTKVDWSP ELHRKFIQAV EQLGIDRAIP SKILELMKVE GLTRHNVASH LQKYRMQKKH  360
AVHREENPRF SMLTNHLKPN MAYPSYYPYC GISMSTVYRT WTQNNGQPAN VNMWGPPDYR  420
HWPQPGTQPW NSYAGMQADA WGCPVMLPSR APYFSYPQQI SSSHNVYTAN KSCYGTPHSS  480
FDLQPDEELI DKIVTEARRK PWSPLPLGLK PPSAESVLKE LSKQGVSTVP PRINGSKPP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	9e-89	ARR-B family protein