PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022930985.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 329aa    MW: 36478.1 Da    PI: 7.7138
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022930985.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.13.1e-0888112126
                     --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                     +kt+lC+ f++ GtC+y  +C+FaH+
  XP_022930985.1  88 FKTKLCCKFRA-GTCPYITNCNFAHS 112
                     69*********.*************8 PP

2zf-CCCH41.91.6e-13222247126
                     --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                     +kt++C+ +  tG+C++G++C+FaHg
  XP_022930985.1 222 WKTRICNKWELTGYCPFGNKCHFAHG 247
                     8************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MDYNGGNVVH VIPGTSSENW PGEVWATEDE YRAWNNGVDG FVDTPSNSSY DQRQSQSRSG  60
SEPPNKKSRS SQDVTSSNRS KAIGKMFFKT KLCCKFRAGT CPYITNCNFA HSIEELRRPP  120
PNWQQEIVAA HEEEKAVFLE PREEFQIPSL GTSNFGSESQ RSYKGRHCKK FYTEEGCPYG  180
DGCTFLHDEQ SKNRESVAIS LGPGGYSGGG SGNGSNTKPS NWKTRICNKW ELTGYCPFGN  240
KCHFAHGAAE TRDSSSAPPD QKQGVLPKAP GDTVVASVPS VPHSDVYHVV IPSQRSTIVI  300
QRSGQRTHQK WKGPDKISRI YGDWIDDNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32360.11e-116C3H family protein