PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022930963.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 309aa    MW: 35666 Da    PI: 6.3165
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022930963.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM171.23.2e-5361331128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lppGfrFhPtdeelv +yLk+kveg ++el evi+ +d+yk++Pw+Lp k  + +++ ew+fF++rd+ky++g+r+nratk+gyWkatgkd++++
  XP_022930963.1   6 LPPGFRFHPTDEELVGYYLKRKVEGLPIEL-EVIPVIDLYKFDPWELPeKsFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKIH 99 
                     79****************************.99**************95344555788************************************* PP

             NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + +++++g +ktLvfy+grap g + dWvmheyrl
  XP_022930963.1 100 C-QSSVIGYRKTLVFYRGRAPLGDRMDWVMHEYRL 133
                     *.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MGSASLPPGF RFHPTDEELV GYYLKRKVEG LPIELEVIPV IDLYKFDPWE LPEKSFLPKR  60
DMEWFFFCPR DRKYPNGSRT NRATKAGYWK ATGKDRKIHC QSSVIGYRKT LVFYRGRAPL  120
GDRMDWVMHE YRLCDDFSHG TPNFKGAFAL CRILKRNEQT HKKENRRDPK GDVVGTSRAR  180
EDSTSTRLVV ANEVSNNSSQ TNFLADGSCL SSSMTTSYDT NPMSLYSTTI METDPEKIWI  240
SPDFILDSSK DYPEMEGAMS VCFPQFEYLG STTPWQSYEH TEMSPSSSYS NYTADIELED  300
HTQHINYMQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17980.11e-110NAC family protein