PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022930845.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GeBP

Protein Properties

Length: 402aa MW: 45487.1 Da PI: 5.1936

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022930845.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	125.7	2e-39	180	274	3	97
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 ++rlwse+Dei++LqG+idf+ +g++p++d+++f ef+kk++s++vsk+ql++K+rrLKkK++++++k ++g++p+f k+h++k+f lskkiWg XP_022930845.1 180 INRLWSEDDEISILQGMIDFQLAKGSDPYADMSQFLEFIKKNLSVDVSKNQLIDKVRRLKKKYRNNSEKGRNGDDPVFLKQHEHKSFVLSKKIWG 274 68********************************************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 402 aa Download sequence
MAPKRLIDDL PSAHAVSDAE EESGFETLGE DPEINNLMQN SEDENEEQTY EDEEDEEDEE 60 EEEDEEHAIP SPIVSKREKS PEKDFGFVSD SDSEKTQSSP SASAFTIKSI LRKSAFGSSK 120 PKKGSHKSSI DCAIVKPVGS GSKRPIENNF HGNELNKKKI KRVINGEDIE EGKKVSGSGI 180 NRLWSEDDEI SILQGMIDFQ LAKGSDPYAD MSQFLEFIKK NLSVDVSKNQ LIDKVRRLKK 240 KYRNNSEKGR NGDDPVFLKQ HEHKSFVLSK KIWGNEAKKK PRKQSVKASN SVSISSPRVD 300 MEAAKKEALN VESKILPEEF LSEFPWLKAS IMVENDKFCS EGLMRLLRER MPSIGSEKAK 360 ELDEKWRKLG ESEVELYLKK VELVREQCKL ILDSMGKARR AS

Sequence ? help Back to Top

Protein Sequence Length: 402 aa Download sequence

MAPKRLIDDL PSAHAVSDAE EESGFETLGE DPEINNLMQN SEDENEEQTY EDEEDEEDEE  60
EEEDEEHAIP SPIVSKREKS PEKDFGFVSD SDSEKTQSSP SASAFTIKSI LRKSAFGSSK  120
PKKGSHKSSI DCAIVKPVGS GSKRPIENNF HGNELNKKKI KRVINGEDIE EGKKVSGSGI  180
NRLWSEDDEI SILQGMIDFQ LAKGSDPYAD MSQFLEFIKK NLSVDVSKNQ LIDKVRRLKK  240
KYRNNSEKGR NGDDPVFLKQ HEHKSFVLSK KIWGNEAKKK PRKQSVKASN SVSISSPRVD  300
MEAAKKEALN VESKILPEEF LSEFPWLKAS IMVENDKFCS EGLMRLLRER MPSIGSEKAK  360
ELDEKWRKLG ESEVELYLKK VELVREQCKL ILDSMGKARR AS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	5e-29	GeBP family protein