PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022930720.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 550aa MW: 58582.1 Da PI: 6.9922

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022930720.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.4	9.3e-31	305	363	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed++++++tYeg+Hnh+ XP_022930720.1 305 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDKTILITTYEGNHNHP 363 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MEAAAPSPPP PPPPTATFHF PVNLNSTLHE PPPSPPPSPP PSPPPPPPFF HSHRALFDEM 60 NFFAADDKSR VLISAADSKL RASDNLSPTK LEFQVNVGHP LNFLTGLNLL TTNYSSDQSM 120 VDDGISSNPQ DTKTKNERAV LQAELERVNT ENQRLKDTLN QVTSNYQSLQ MQFTTLIQTQ 180 KAADAGDSTD EKAGDQETIR HGGGGANNGN KLVPRQFMDL GLATNADIDE PSMSSSEGRS 240 DRSPGTTGEV ASSKRHSPDQ GSNLGSNKAS KFSSSSSSKD VDQTEATMRK ARVSVRARSE 300 APMITDGCQW RKYGQKMAKG NPCPRAYYRC TMAAGCPVRK QVQRCAEDKT ILITTYEGNH 360 NHPLPPAAMA MASTTSSAAR MLLSGSMSSA DGLMNPNFLA RTLLPCSSSM ATISASAPFP 420 TVTLDLTQTP NPLFQRPAPG HFPIPFAAGP TQSFPQIFGH ALYNQSKFSG LQMSKDIEGP 480 TPPPPSQNPL ADTLSAASAA IASDPNFIAA LASAMTSLIG GSHHQKENGN GNGNGNNNNV 540 DNNTTSNSQQ

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MEAAAPSPPP PPPPTATFHF PVNLNSTLHE PPPSPPPSPP PSPPPPPPFF HSHRALFDEM  60
NFFAADDKSR VLISAADSKL RASDNLSPTK LEFQVNVGHP LNFLTGLNLL TTNYSSDQSM  120
VDDGISSNPQ DTKTKNERAV LQAELERVNT ENQRLKDTLN QVTSNYQSLQ MQFTTLIQTQ  180
KAADAGDSTD EKAGDQETIR HGGGGANNGN KLVPRQFMDL GLATNADIDE PSMSSSEGRS  240
DRSPGTTGEV ASSKRHSPDQ GSNLGSNKAS KFSSSSSSKD VDQTEATMRK ARVSVRARSE  300
APMITDGCQW RKYGQKMAKG NPCPRAYYRC TMAAGCPVRK QVQRCAEDKT ILITTYEGNH  360
NHPLPPAAMA MASTTSSAAR MLLSGSMSSA DGLMNPNFLA RTLLPCSSSM ATISASAPFP  420
TVTLDLTQTP NPLFQRPAPG HFPIPFAAGP TQSFPQIFGH ALYNQSKFSG LQMSKDIEGP  480
TPPPPSQNPL ADTLSAASAA IASDPNFIAA LASAMTSLIG GSHHQKENGN GNGNGNNNNV  540
DNNTTSNSQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-108	WRKY family protein