PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022930596.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 431aa    MW: 46533.7 Da    PI: 7.7582
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022930596.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.11.5e-08106127325
                     S---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH   3 telCrffartGtCkyGdrCkFaH 25 
                     ++lC+f+ + G C yGd+C+F H
  XP_022930596.1 106 EKLCNFWVQ-GKCGYGDKCRFLH 127
                     579******.************* PP

Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    
MDVDGGGKRV FQRLGAPSGD GRNQKVCYHW RAGKCNRYPC PFLHRELNAP PHATSNGATN  60
AAPKRGNGFS SDDSSVSVPR RSPNFSGGST WGRVHGGGNR VVKKTEKLCN FWVQGKCGYG  120
DKCRFLHTWS LGESFSHLTQ LDGHQKVVTG IAFPSGSDKL YTGSKDETVR VWDCQSGQCL  180
AVINLCGEVG SMITEGPWVF VGIPNCVKAW NIQTSADLSL SGPVGLVYAL VVGNDLLFAG  240
TQDGSILAWK FNVATNCFEP AASLNGHTLP VVSLVVGANR LYSGSMDHSI KVWSLESLQC  300
LQTLTDHTSV VMSVLCWEQF LLSCSLDKTI KVWAATESGN LEVTYTHTED HGLLTLCGMH  360
DLDGKPILLC SCNDNSVRLY DLPSFSERGK IHSKGEIRSI QAGPGGVFFT GDGTGQVKVW  420
KWSAEHAAAG M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25440.10.0C3H family protein