PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022930487.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 122aa    MW: 13090.7 Da    PI: 9.0698
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022930487.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2157.1e-053052123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ Cg+ F ++  L  H++ H
  XP_022930487.1 30 FECQFCGREFANSQALGGHQNAH 52
                    89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MKLFGFSVTA SDQATMGAPC ANLNKDDKRF ECQFCGREFA NSQALGGHQN AHKRERQLAK  60
QLRFDPNKHP RFFTSTPPPS ATVIWSRSGG APPSAAGGGG EVNGENGVDL HLSLAPSSRI  120
FC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.12e-15C2H2 family protein