PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022930391.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 917aa MW: 104403 Da PI: 7.9227

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022930391.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	163.5	3.8e-51	35	150	4	118
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 e + rwl+++ei+aiL n++ + ++ ++ + p+sg+++L+nrk++r+frkDG++wkkkkdgkt++E+he+LKvg+ve +++yYah+ +n+tf rr XP_022930391.1 35 EaSGRWLRPNEIHAILCNYKYFVIHVKPVNLPTSGTIVLFNRKMLRNFRKDGHNWKKKKDGKTIKEAHEHLKVGNVERIHVYYAHGLDNTTFVRR 129 4478***************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylevk 118 cywlL+++le+ivlvhy+e++ XP_022930391.1 130 CYWLLDKTLEHIVLVHYRETQ 150 ****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 917 aa Download sequence
MSLPMKADVQ GSLVGSEIHG FHTLQELDVT NIREEASGRW LRPNEIHAIL CNYKYFVIHV 60 KPVNLPTSGT IVLFNRKMLR NFRKDGHNWK KKKDGKTIKE AHEHLKVGNV ERIHVYYAHG 120 LDNTTFVRRC YWLLDKTLEH IVLVHYRETQ EVNFSPMHLQ SSPSMSMNSN SGSVSDPSTP 180 CLLSEELDSR DNHGYSVDKN ERSEPRDTTT AMNHEQRLHE INTLEWDELL VTDEPFKPSI 240 PKGDRFSYFD QRSQVPTNVA NNLLGNTPLF NNPVEPIGSA YMPLTSGQTN LNVESKESIP 300 ITSLDNLLND GLLQSQDSFG RWINEVITES PDTVIDPAIE PSISSIHNSF TDPTLNHCQS 360 SVMEQIFNIT DISPAWAFST EKTKILITGY FHNEYLHLAN SNILVVCGNA SVNADLIQPG 420 VYRCVVQPHS TGLVNLFVSL DGHKPISQVL NFEYRAPLLR EPVVASEQIQ KWEEFQVQMR 480 LAHLLFSTSR SLSIMSTKLS PTSLNEARKF AVKTSDISDS WIYLLNSIKE NNTPFPQARA 540 CVLEIILKSR LREWLIERVA EGSKKSTDFD IKGQGVIHLC AILGYTWAIH LFAWSGLSIN 600 FRDKFGWTAL HWAAYYGREK MVAVLLSVGA KPNLVTDPSS KNPLGYIAAD LASLNGYDGL 660 AAYLSEKALV SHFNDMSLAG NVRGSLETST MTDATNSDSI SEEQMYMKET LAAYRTAADA 720 AARIQTAFRE NSLKQRTQAI EFSTPEDEAR GIVAAMKIQH AYRNFESRKR MAAAARIQYR 780 FRTWKIRKEF LNMRRHAIRI QAAFRGFQMR RQYRKILWSV GVIDKAILRW RLKRKGFRGL 840 QVAPAEVTEQ QEIGVEEDFY HVSQKQAEER VEKAVVRVQA LFRSKKAQEE YRRMKLTYNE 900 AALEYEELSH PDMNLSS

Sequence ? help Back to Top

Protein Sequence Length: 917 aa Download sequence

MSLPMKADVQ GSLVGSEIHG FHTLQELDVT NIREEASGRW LRPNEIHAIL CNYKYFVIHV  60
KPVNLPTSGT IVLFNRKMLR NFRKDGHNWK KKKDGKTIKE AHEHLKVGNV ERIHVYYAHG  120
LDNTTFVRRC YWLLDKTLEH IVLVHYRETQ EVNFSPMHLQ SSPSMSMNSN SGSVSDPSTP  180
CLLSEELDSR DNHGYSVDKN ERSEPRDTTT AMNHEQRLHE INTLEWDELL VTDEPFKPSI  240
PKGDRFSYFD QRSQVPTNVA NNLLGNTPLF NNPVEPIGSA YMPLTSGQTN LNVESKESIP  300
ITSLDNLLND GLLQSQDSFG RWINEVITES PDTVIDPAIE PSISSIHNSF TDPTLNHCQS  360
SVMEQIFNIT DISPAWAFST EKTKILITGY FHNEYLHLAN SNILVVCGNA SVNADLIQPG  420
VYRCVVQPHS TGLVNLFVSL DGHKPISQVL NFEYRAPLLR EPVVASEQIQ KWEEFQVQMR  480
LAHLLFSTSR SLSIMSTKLS PTSLNEARKF AVKTSDISDS WIYLLNSIKE NNTPFPQARA  540
CVLEIILKSR LREWLIERVA EGSKKSTDFD IKGQGVIHLC AILGYTWAIH LFAWSGLSIN  600
FRDKFGWTAL HWAAYYGREK MVAVLLSVGA KPNLVTDPSS KNPLGYIAAD LASLNGYDGL  660
AAYLSEKALV SHFNDMSLAG NVRGSLETST MTDATNSDSI SEEQMYMKET LAAYRTAADA  720
AARIQTAFRE NSLKQRTQAI EFSTPEDEAR GIVAAMKIQH AYRNFESRKR MAAAARIQYR  780
FRTWKIRKEF LNMRRHAIRI QAAFRGFQMR RQYRKILWSV GVIDKAILRW RLKRKGFRGL  840
QVAPAEVTEQ QEIGVEEDFY HVSQKQAEER VEKAVVRVQA LFRSKKAQEE YRRMKLTYNE  900
AALEYEELSH PDMNLSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein