PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022930390.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 919aa MW: 104644 Da PI: 7.9227

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022930390.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	163.5	3.8e-51	35	150	4	118
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 e + rwl+++ei+aiL n++ + ++ ++ + p+sg+++L+nrk++r+frkDG++wkkkkdgkt++E+he+LKvg+ve +++yYah+ +n+tf rr XP_022930390.1 35 EaSGRWLRPNEIHAILCNYKYFVIHVKPVNLPTSGTIVLFNRKMLRNFRKDGHNWKKKKDGKTIKEAHEHLKVGNVERIHVYYAHGLDNTTFVRR 129 4478***************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylevk 118 cywlL+++le+ivlvhy+e++ XP_022930390.1 130 CYWLLDKTLEHIVLVHYRETQ 150 ****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 919 aa Download sequence
MSLPMKADVQ GSLVGSEIHG FHTLQELDVT NIREEASGRW LRPNEIHAIL CNYKYFVIHV 60 KPVNLPTSGT IVLFNRKMLR NFRKDGHNWK KKKDGKTIKE AHEHLKVGNV ERIHVYYAHG 120 LDNTTFVRRC YWLLDKTLEH IVLVHYRETQ EVNFSPMHLQ LQSSPSMSMN SNSGSVSDPS 180 TPCLLSEELD SRDNHGYSVD KNERSEPRDT TTAMNHEQRL HEINTLEWDE LLVTDEPFKP 240 SIPKGDRFSY FDQRSQVPTN VANNLLGNTP LFNNPVEPIG SAYMPLTSGQ TNLNVESKES 300 IPITSLDNLL NDGLLQSQDS FGRWINEVIT ESPDTVIDPA IEPSISSIHN SFTDPTLNHC 360 QSSVMEQIFN ITDISPAWAF STEKTKILIT GYFHNEYLHL ANSNILVVCG NASVNADLIQ 420 PGVYRCVVQP HSTGLVNLFV SLDGHKPISQ VLNFEYRAPL LREPVVASEQ IQKWEEFQVQ 480 MRLAHLLFST SRSLSIMSTK LSPTSLNEAR KFAVKTSDIS DSWIYLLNSI KENNTPFPQA 540 RACVLEIILK SRLREWLIER VAEGSKKSTD FDIKGQGVIH LCAILGYTWA IHLFAWSGLS 600 INFRDKFGWT ALHWAAYYGR EKMVAVLLSV GAKPNLVTDP SSKNPLGYIA ADLASLNGYD 660 GLAAYLSEKA LVSHFNDMSL AGNVRGSLET STMTDATNSD SISEEQMYMK ETLAAYRTAA 720 DAAARIQTAF RENSLKQRTQ AIEFSTPEDE ARGIVAAMKI QHAYRNFESR KRMAAAARIQ 780 YRFRTWKIRK EFLNMRRHAI RIQAAFRGFQ MRRQYRKILW SVGVIDKAIL RWRLKRKGFR 840 GLQVAPAEVT EQQEIGVEED FYHVSQKQAE ERVEKAVVRV QALFRSKKAQ EEYRRMKLTY 900 NEAALEYEEL SHPDMNLSS

Sequence ? help Back to Top

Protein Sequence Length: 919 aa Download sequence

MSLPMKADVQ GSLVGSEIHG FHTLQELDVT NIREEASGRW LRPNEIHAIL CNYKYFVIHV  60
KPVNLPTSGT IVLFNRKMLR NFRKDGHNWK KKKDGKTIKE AHEHLKVGNV ERIHVYYAHG  120
LDNTTFVRRC YWLLDKTLEH IVLVHYRETQ EVNFSPMHLQ LQSSPSMSMN SNSGSVSDPS  180
TPCLLSEELD SRDNHGYSVD KNERSEPRDT TTAMNHEQRL HEINTLEWDE LLVTDEPFKP  240
SIPKGDRFSY FDQRSQVPTN VANNLLGNTP LFNNPVEPIG SAYMPLTSGQ TNLNVESKES  300
IPITSLDNLL NDGLLQSQDS FGRWINEVIT ESPDTVIDPA IEPSISSIHN SFTDPTLNHC  360
QSSVMEQIFN ITDISPAWAF STEKTKILIT GYFHNEYLHL ANSNILVVCG NASVNADLIQ  420
PGVYRCVVQP HSTGLVNLFV SLDGHKPISQ VLNFEYRAPL LREPVVASEQ IQKWEEFQVQ  480
MRLAHLLFST SRSLSIMSTK LSPTSLNEAR KFAVKTSDIS DSWIYLLNSI KENNTPFPQA  540
RACVLEIILK SRLREWLIER VAEGSKKSTD FDIKGQGVIH LCAILGYTWA IHLFAWSGLS  600
INFRDKFGWT ALHWAAYYGR EKMVAVLLSV GAKPNLVTDP SSKNPLGYIA ADLASLNGYD  660
GLAAYLSEKA LVSHFNDMSL AGNVRGSLET STMTDATNSD SISEEQMYMK ETLAAYRTAA  720
DAAARIQTAF RENSLKQRTQ AIEFSTPEDE ARGIVAAMKI QHAYRNFESR KRMAAAARIQ  780
YRFRTWKIRK EFLNMRRHAI RIQAAFRGFQ MRRQYRKILW SVGVIDKAIL RWRLKRKGFR  840
GLQVAPAEVT EQQEIGVEED FYHVSQKQAE ERVEKAVVRV QALFRSKKAQ EEYRRMKLTY  900
NEAALEYEEL SHPDMNLSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein