PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022930379.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | ERF | ||||||||
Protein Properties | Length: 229aa MW: 25653.9 Da PI: 5.9392 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 67.8 | 2e-21 | 70 | 119 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 y+G+r+++ +g+W+AeIrdp + r++lg+f taeeAa+a+++a+k+++ge XP_022930379.1 70 YRGIRQRP-WGKWAAEIRDPQ----KgVRVWLGTFNTAEEAARAYDEAAKRIRGE 119 9*******.**********94....35**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MCGGSLISGI IEKKRGRKLR NGSLWPDTDH FSDLLGLDYC ALKTETSQKE CRATAVPEPE 60 KTRKARKNIY RGIRQRPWGK WAAEIRDPQK GVRVWLGTFN TAEEAARAYD EAAKRIRGEK 120 AKLNFAPRPQ PLPVSQPPAK KRCVAHELTS DCFSSTSPAP ASTRVNNSCE IDGLYYGEEL 180 ASLRSFLDLD FEEEQEPSQV GGSDEFGQAV ELWMMDDPSL NEEKFGEVV |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 12 | 19 | EKKRGRKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16770.1 | 4e-44 | ERF family protein |