PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022930100.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 292aa MW: 32378.3 Da PI: 8.3431

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022930100.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.5	2.4e-05	122	141	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r n++ H+ XP_022930100.1 122 FSCSVCSKTFNRYNNMQMHM 141 89*****************9 PP
2	zf-C2H2	16.1	3.2e-05	207	229	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cgk+F + + ++H +++ XP_022930100.1 207 FSCRKCGKPFAVRGDWRTHEKNC 229 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MRSGNLTCIS SSESLEGDEG GGGGGGGEDS IFLSLCPPGQ RHTVSSKHRQ LQNKQIPVSP 60 NSSLQNPNIL HHQHAAVTVA MHIGPPATAA ATESNDVSAA RPVDGQYWIP TPAQILVGPT 120 QFSCSVCSKT FNRYNNMQMH MWGHGSQYRK GPESLRGSKP ASSMLRLPCY CCAEGCKNNI 180 EHPRSRPLKD FRTLQTHYKR KHGAKPFSCR KCGKPFAVRG DWRTHEKNCG KLWFCICGSD 240 FKHKRSLKDH VRAFGDGHAP HTVQLCEVED DDWDDNDDHE HVNGAQPWSI YH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13290.1	1e-118	C2H2 family protein