PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022930095.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C3H | ||||||||
Protein Properties | Length: 235aa MW: 25531.7 Da PI: 10.029 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 31.3 | 3.4e-10 | 193 | 219 | 1 | 27 |
--S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 1 yktelCrffartGtCkyGdrCkFaHgp 27 y+t +Cr + +G C++G +C+FaHg+ XP_022930095.1 193 YRTDICRSWEDSGSCRFGHKCQFAHGK 219 89***********************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MEDRQGKRSS KASTIKGLNA TVRPIKIQMD NHLVIGGTGH YHQETNSKIP TILDRYAEKH 60 DRSTPIVSYF RSRSPVVGKL PSVGDTFSTP VADVINANYR SSIINHFASS TSGSSSFGSR 120 RGGSSLSPLS AIENLETTPV RSPQIYGTPL KVHEEVIVMD EILISSVHGG AKTLKSALES 180 GGGGGSSLSK NQYRTDICRS WEDSGSCRFG HKCQFAHGKE ELRPVHLPLK TKPKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66810.1 | 5e-09 | C3H family protein |