PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022930066.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 323aa    MW: 35482.9 Da    PI: 5.6395
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022930066.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH451.9e-14137183354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  XP_022930066.1 137 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 183
                     79*************************9.....8****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MKEEGECFQG FQEHLLMQQF QTMQQNSDVF GVGGGGGGGG LIFPEVSPMM FTPPWTATTT  60
IPQVHHDPFI PPPPPPSYAS FFNRRSASLQ FPYDIGNNSL GIGQMGQPGS GPFGLQAELS  120
KMSAQEIMDA KALAASKSHS EAERRRRERI NNHLAKLRSL LPSTTKTDKA SLLAEVIQHV  180
KELKRQTTLI ADVSPVPTEL DELSVDVDAS DEDGKFVIKA SLCCEDRSDL LPQIIKTLKS  240
LRLRTLKAEI TTLGGRVKNV LFITGDDDSS SDQEEAEQQQ HQYSISSIQE ALKGVMEKVC  300
SEDQSSSGSI KRQRTNNHNN VNI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1143148ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.16e-77bHLH family protein