PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022929806.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 731aa MW: 80614.2 Da PI: 5.8397

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022929806.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.6	4.4e-16	24	68	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ ++++a k++G W +I +++g ++t+ q++s+ qk+ XP_022929806.1 24 RERWTEEEHNRFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 731 aa Download sequence
MEPNSSGEDL VFKTRKPYTI TKQRERWTEE EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFS KLEKEALIKG IPVGQTLDID IPPPRPKRKP SNPYPRKTPI SKLGANDGKL 120 LTLVSSSQSK QILDLEKEPL NEATSGEEQA TSEMDTHDDN CSEVFTLSRE ANFFSWKNKN 180 SVPAQVKLNL NDLCAFREFV PSFKEPLHDK GRGKVSEFEI ASASQEKIVS AEKKEALSCV 240 LSGDEMQVAH NYPRHVPVHV VDGSLGANVQ ESVTDTPLQE SSFNPAMEVP GEHNIHRNPS 300 DSVSFERQNN APRCIYQSYP TVHPSPFTLL PPNQENYKSL LHMSSSFSNL VVSTLQQNPA 360 AHAIASLTAT CWPYVNPEAS VDSPMCDKES FRTKQMNSTP SMEAIATATV AAATAWWTAH 420 GLLPLCAPFH SAFTSSAISA PVAQPSDTCP NPESKDKAES SMQIDAEQSE ALTAQHSGSK 480 SPTHSSSDSE GSGGANANAN ATVKPAHDEK TPAEDEFHDS NKGKRGKQVD RSSCGSNTPS 540 GSDQEIDATE NNDKEEKEEK ELEMTCPASE SSNRRSRCIS NINESWKEVS DEVKRGRLAF 600 QALFTRDILP QSFSPSYDVE NENEKNGNVE KDSNIIDKDS CASVMDLNSK ICGPSRDQVM 660 ERYTSATGDN NGEGKILTIG QGNGTPKGCR TGFKPYKRCS VEAKEKRMTT SSNHSEEGDQ 720 KRLRLEQKAT N

Sequence ? help Back to Top

Protein Sequence Length: 731 aa Download sequence

MEPNSSGEDL VFKTRKPYTI TKQRERWTEE EHNRFLEALK LYGRAWQRIE EHIGTKTAVQ  60
IRSHAQKFFS KLEKEALIKG IPVGQTLDID IPPPRPKRKP SNPYPRKTPI SKLGANDGKL  120
LTLVSSSQSK QILDLEKEPL NEATSGEEQA TSEMDTHDDN CSEVFTLSRE ANFFSWKNKN  180
SVPAQVKLNL NDLCAFREFV PSFKEPLHDK GRGKVSEFEI ASASQEKIVS AEKKEALSCV  240
LSGDEMQVAH NYPRHVPVHV VDGSLGANVQ ESVTDTPLQE SSFNPAMEVP GEHNIHRNPS  300
DSVSFERQNN APRCIYQSYP TVHPSPFTLL PPNQENYKSL LHMSSSFSNL VVSTLQQNPA  360
AHAIASLTAT CWPYVNPEAS VDSPMCDKES FRTKQMNSTP SMEAIATATV AAATAWWTAH  420
GLLPLCAPFH SAFTSSAISA PVAQPSDTCP NPESKDKAES SMQIDAEQSE ALTAQHSGSK  480
SPTHSSSDSE GSGGANANAN ATVKPAHDEK TPAEDEFHDS NKGKRGKQVD RSSCGSNTPS  540
GSDQEIDATE NNDKEEKEEK ELEMTCPASE SSNRRSRCIS NINESWKEVS DEVKRGRLAF  600
QALFTRDILP QSFSPSYDVE NENEKNGNVE KDSNIIDKDS CASVMDLNSK ICGPSRDQVM  660
ERYTSATGDN NGEGKILTIG QGNGTPKGCR TGFKPYKRCS VEAKEKRMTT SSNHSEEGDQ  720
KRLRLEQKAT N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01060.4	3e-96	MYB_related family protein