PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022929256.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 931aa MW: 104663 Da PI: 6.8324

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022929256.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	51.5	1.9e-16	13	55	76	118
CG-1 76 ggvevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118 g+v vl+cyYah+een++fqrr+yw+Lee+l++ivlvhylev+ XP_022929256.1 13 GSVYVLQCYYAHGEENENFQRRTYWMLEEDLSHIVLVHYLEVQ 55 67899***********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 931 aa Download sequence
MLQTQLFCIG QAGSVYVLQC YYAHGEENEN FQRRTYWMLE EDLSHIVLVH YLEVQSNRAN 60 FNRIQGTDEA ALFSRESEET TSHSGMDASK SCRFHPSNYQ ILSQTTEISL NSAQASEYED 120 AESEYGNRES NVFHSVLGLQ RSNMESTSRE PCDPNYPAPL SENFTAFGGN CFPTSSDRSK 180 DSNHAESIHE PHKNLCFSSD NVLKSGATGI YSPHLQPSFS TSRPKILDNV PKQGDGIMGL 240 PFSDRCKRED FGNHLLAQED CEATLEGKSK FAKKQPLLNA ITTEALRKSD SFNQWMSREL 300 GDVKEASMQC NSGAHWNSVE NEVGNSSISS QAHLDTYMFS RSLSHEQLFS IIDFSPSWAY 360 EGSEIKVLIS GKFLKRKQEV ENLKWSCMFG EVEVPAEVIA NGVLRCFTPM HKAGRVPFYV 420 TRSNRLACSE VQNFEYRVKC IQDVEVMYDT SITNEALALR FVKLLCLSCS DTLIADPNSS 480 SDRSGFNKVR ELLKVDNSEW DQFMKPRWDE NVSLGSTKEL LLQRLLKEKL HVWLLQKVRE 540 GGRGPSVLDE HGQGVLHFAA ALNYDWALLP AVVAGINVNF RDANGWTALH WAAFFGRERT 600 VAALISLGAA PGALTDPSPK YPHGRTPADL ASSNGHKGIA GYLGESALSA HLESLNFDNK 660 KSKAVDTCGK KAVHTASERV ATPPQGNDMH TLSLKDSLAA VSNATQAAAR IHEVMRMQSF 720 QKKQLLDLSN YQPLSLLPVK RRNSGSHDEH AAAIRIQNKF RCWKGRKDFL IIRQRIVKIQ 780 AHVRGHQVRK NYRSIVWSVG ILEKVILRWR RKGSGLRGFK AEALSEDSSK QNPSVTEDDD 840 DDEFFKKGRK QTEERLQMAL ARVKSMVQYP EARDQYRRLL NVVTEMRQTK VKDGVVDNVD 900 ETADFDDLID IEALLDEDAF LPNASSNFSV Y

Sequence ? help Back to Top

Protein Sequence Length: 931 aa Download sequence

MLQTQLFCIG QAGSVYVLQC YYAHGEENEN FQRRTYWMLE EDLSHIVLVH YLEVQSNRAN  60
FNRIQGTDEA ALFSRESEET TSHSGMDASK SCRFHPSNYQ ILSQTTEISL NSAQASEYED  120
AESEYGNRES NVFHSVLGLQ RSNMESTSRE PCDPNYPAPL SENFTAFGGN CFPTSSDRSK  180
DSNHAESIHE PHKNLCFSSD NVLKSGATGI YSPHLQPSFS TSRPKILDNV PKQGDGIMGL  240
PFSDRCKRED FGNHLLAQED CEATLEGKSK FAKKQPLLNA ITTEALRKSD SFNQWMSREL  300
GDVKEASMQC NSGAHWNSVE NEVGNSSISS QAHLDTYMFS RSLSHEQLFS IIDFSPSWAY  360
EGSEIKVLIS GKFLKRKQEV ENLKWSCMFG EVEVPAEVIA NGVLRCFTPM HKAGRVPFYV  420
TRSNRLACSE VQNFEYRVKC IQDVEVMYDT SITNEALALR FVKLLCLSCS DTLIADPNSS  480
SDRSGFNKVR ELLKVDNSEW DQFMKPRWDE NVSLGSTKEL LLQRLLKEKL HVWLLQKVRE  540
GGRGPSVLDE HGQGVLHFAA ALNYDWALLP AVVAGINVNF RDANGWTALH WAAFFGRERT  600
VAALISLGAA PGALTDPSPK YPHGRTPADL ASSNGHKGIA GYLGESALSA HLESLNFDNK  660
KSKAVDTCGK KAVHTASERV ATPPQGNDMH TLSLKDSLAA VSNATQAAAR IHEVMRMQSF  720
QKKQLLDLSN YQPLSLLPVK RRNSGSHDEH AAAIRIQNKF RCWKGRKDFL IIRQRIVKIQ  780
AHVRGHQVRK NYRSIVWSVG ILEKVILRWR RKGSGLRGFK AEALSEDSSK QNPSVTEDDD  840
DDEFFKKGRK QTEERLQMAL ARVKSMVQYP EARDQYRRLL NVVTEMRQTK VKDGVVDNVD  900
ETADFDDLID IEALLDEDAF LPNASSNFSV Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein