PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022929255.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 971aa MW: 109336 Da PI: 7.6424

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022929255.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	126.1	1.4e-39	12	95	34	118
CG-1 34 pksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhylevk 118 gsl+Ly+rk++ryfrkDG++w+kkk gk+v+E+he+LK g+v vl+cyYah+een++fqrr+yw+Lee+l++ivlvhylev+ XP_022929255.1 12 SIGGSLFLYDRKVLRYFRKDGHNWRKKK-GKAVKEAHERLKAGSVYVLQCYYAHGEENENFQRRTYWMLEEDLSHIVLVHYLEVQ 95 4579******************9887.9**************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 971 aa Download sequence
MAESGRHTPG NSIGGSLFLY DRKVLRYFRK DGHNWRKKKG KAVKEAHERL KAGSVYVLQC 60 YYAHGEENEN FQRRTYWMLE EDLSHIVLVH YLEVQSNRAN FNRIQGTDEA ALFSRESEET 120 TSHSGMDASK SCRFHPSNYQ ILSQTTEISL NSAQASEYED AESEYGNRES NVFHSVLGLQ 180 RSNMESTSRE PCDPNYPAPL SENFTAFGGN CFPTSSDRSK DSNHAESIHE PHKNLCFSSD 240 NVLKSGATGI YSPHLQPSFS TSRPKILDNV PKQGDGIMGL PFSDRCKRED FGNHLLAQED 300 CEATLEGKSK FAKKQPLLNA ITTEALRKSD SFNQWMSREL GDVKEASMQC NSGAHWNSVE 360 NEVGNSSISS QAHLDTYMFS RSLSHEQLFS IIDFSPSWAY EGSEIKVLIS GKFLKRKQEV 420 ENLKWSCMFG EVEVPAEVIA NGVLRCFTPM HKAGRVPFYV TRSNRLACSE VQNFEYRVKC 480 IQDVEVMYDT SITNEALALR FVKLLCLSCS DTLIADPNSS SDRSGFNKVR ELLKVDNSEW 540 DQFMKPRWDE NVSLGSTKEL LLQRLLKEKL HVWLLQKVRE GGRGPSVLDE HGQGVLHFAA 600 ALNYDWALLP AVVAGINVNF RDANGWTALH WAAFFGRERT VAALISLGAA PGALTDPSPK 660 YPHGRTPADL ASSNGHKGIA GYLGESALSA HLESLNFDNK KSKAVDTCGK KAVHTASERV 720 ATPPQGNDMH TLSLKDSLAA VSNATQAAAR IHEVMRMQSF QKKQLLDLSN YQPLSLLPVK 780 RRNSGSHDEH AAAIRIQNKF RCWKGRKDFL IIRQRIVKIQ AHVRGHQVRK NYRSIVWSVG 840 ILEKVILRWR RKGSGLRGFK AEALSEDSSK QNPSVTEDDD DDEFFKKGRK QTEERLQMAL 900 ARVKSMVQYP EARDQYRRLL NVVTEMRQTK VKDGVVDNVD ETADFDDLID IEALLDEDAF 960 LPNASSNFSV Y

Sequence ? help Back to Top

Protein Sequence Length: 971 aa Download sequence

MAESGRHTPG NSIGGSLFLY DRKVLRYFRK DGHNWRKKKG KAVKEAHERL KAGSVYVLQC  60
YYAHGEENEN FQRRTYWMLE EDLSHIVLVH YLEVQSNRAN FNRIQGTDEA ALFSRESEET  120
TSHSGMDASK SCRFHPSNYQ ILSQTTEISL NSAQASEYED AESEYGNRES NVFHSVLGLQ  180
RSNMESTSRE PCDPNYPAPL SENFTAFGGN CFPTSSDRSK DSNHAESIHE PHKNLCFSSD  240
NVLKSGATGI YSPHLQPSFS TSRPKILDNV PKQGDGIMGL PFSDRCKRED FGNHLLAQED  300
CEATLEGKSK FAKKQPLLNA ITTEALRKSD SFNQWMSREL GDVKEASMQC NSGAHWNSVE  360
NEVGNSSISS QAHLDTYMFS RSLSHEQLFS IIDFSPSWAY EGSEIKVLIS GKFLKRKQEV  420
ENLKWSCMFG EVEVPAEVIA NGVLRCFTPM HKAGRVPFYV TRSNRLACSE VQNFEYRVKC  480
IQDVEVMYDT SITNEALALR FVKLLCLSCS DTLIADPNSS SDRSGFNKVR ELLKVDNSEW  540
DQFMKPRWDE NVSLGSTKEL LLQRLLKEKL HVWLLQKVRE GGRGPSVLDE HGQGVLHFAA  600
ALNYDWALLP AVVAGINVNF RDANGWTALH WAAFFGRERT VAALISLGAA PGALTDPSPK  660
YPHGRTPADL ASSNGHKGIA GYLGESALSA HLESLNFDNK KSKAVDTCGK KAVHTASERV  720
ATPPQGNDMH TLSLKDSLAA VSNATQAAAR IHEVMRMQSF QKKQLLDLSN YQPLSLLPVK  780
RRNSGSHDEH AAAIRIQNKF RCWKGRKDFL IIRQRIVKIQ AHVRGHQVRK NYRSIVWSVG  840
ILEKVILRWR RKGSGLRGFK AEALSEDSSK QNPSVTEDDD DDEFFKKGRK QTEERLQMAL  900
ARVKSMVQYP EARDQYRRLL NVVTEMRQTK VKDGVVDNVD ETADFDDLID IEALLDEDAF  960
LPNASSNFSV Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein