PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022929254.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 1007aa MW: 113512 Da PI: 7.5417

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022929254.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	163.6	3.4e-51	20	135	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 l+ k+rwl++ ei++iL+n++k+++++e+++ p+sgsl+Ly+rk++ryfrkDG++w+kkk gk+v+E+he+LK g+v vl+cyYah+een++fqr XP_022929254.1 20 LEAKHRWLRPAEICEILKNHDKFSIASEPANMPPSGSLFLYDRKVLRYFRKDGHNWRKKK-GKAVKEAHERLKAGSVYVLQCYYAHGEENENFQR 113 6679**************************************************9887.9***************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Lee+l++ivlvhylev+ XP_022929254.1 114 RTYWMLEEDLSHIVLVHYLEVQ 135 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1007 aa Download sequence
MAESGRHTPG NSIDIEQNLL EAKHRWLRPA EICEILKNHD KFSIASEPAN MPPSGSLFLY 60 DRKVLRYFRK DGHNWRKKKG KAVKEAHERL KAGSVYVLQC YYAHGEENEN FQRRTYWMLE 120 EDLSHIVLVH YLEVQSNRAN FNRIQGTDEA ALFSRESEET TSHSGMDASK SCRFHPSNYQ 180 ILSQTTEISL NSAQASEYED AESEYGNRES NVFHSVLGLQ RSNMESTSRE PCDPNYPAPL 240 SAFGGNCFPT SSDRSKDSNH AESIHEPHKN LCFSSDNVLK SGATGIYSPH LQPSFSTSRP 300 KILDNVPKQG DGIMGLPFSD RCKREDFGNH LLAQEDCEAT LEGKSKFAKK QPLLNAITTE 360 ALRKSDSFNQ WMSRELGDVK EASMQCNSGA HWNSVENEVG NSSISSQAHL DTYMFSRSLS 420 HEQLFSIIDF SPSWAYEGSE IKVLISGKFL KRKQEVENLK WSCMFGEVEV PAEVIANGVL 480 RCFTPMHKAG RVPFYVTRSN RLACSEVQNF EYRVKCIQDV EVMYDTSITN EALALRFVKL 540 LCLSCSDTLI ADPNSSSDRS GFNKVRELLK VDNSEWDQFM KPRWDENVSL GSTKELLLQR 600 LLKEKLHVWL LQKVREGGRG PSVLDEHGQG VLHFAAALNY DWALLPAVVA GINVNFRDAN 660 GWTALHWAAF FGRERTVAAL ISLGAAPGAL TDPSPKYPHG RTPADLASSN GHKGIAGYLG 720 ESALSAHLES LNFDNKKSKA VDTCGKKAVH TASERVATPP QGNDMHTLSL KDSLAAVSNA 780 TQAAARIHEV MRMQSFQKKQ LLDLSNYQPL SLLPVKRRNS GSHDEHAAAI RIQNKFRCWK 840 GRKDFLIIRQ RIVKIQAHVR GHQVRKNYRS IVWSVGILEK VILRWRRKGS GLRGFKAEAL 900 SEDSSKQNPS VTEDDDDDEF FKKGRKQTEE RLQMALARVK SMVQYPEARD QYRRLLNVVT 960 EMRQTKVKDG VVDNVDETAD FDDLIDIEAL LDEDAFLPNA SSNFSVY

Sequence ? help Back to Top

Protein Sequence Length: 1007 aa Download sequence

MAESGRHTPG NSIDIEQNLL EAKHRWLRPA EICEILKNHD KFSIASEPAN MPPSGSLFLY  60
DRKVLRYFRK DGHNWRKKKG KAVKEAHERL KAGSVYVLQC YYAHGEENEN FQRRTYWMLE  120
EDLSHIVLVH YLEVQSNRAN FNRIQGTDEA ALFSRESEET TSHSGMDASK SCRFHPSNYQ  180
ILSQTTEISL NSAQASEYED AESEYGNRES NVFHSVLGLQ RSNMESTSRE PCDPNYPAPL  240
SAFGGNCFPT SSDRSKDSNH AESIHEPHKN LCFSSDNVLK SGATGIYSPH LQPSFSTSRP  300
KILDNVPKQG DGIMGLPFSD RCKREDFGNH LLAQEDCEAT LEGKSKFAKK QPLLNAITTE  360
ALRKSDSFNQ WMSRELGDVK EASMQCNSGA HWNSVENEVG NSSISSQAHL DTYMFSRSLS  420
HEQLFSIIDF SPSWAYEGSE IKVLISGKFL KRKQEVENLK WSCMFGEVEV PAEVIANGVL  480
RCFTPMHKAG RVPFYVTRSN RLACSEVQNF EYRVKCIQDV EVMYDTSITN EALALRFVKL  540
LCLSCSDTLI ADPNSSSDRS GFNKVRELLK VDNSEWDQFM KPRWDENVSL GSTKELLLQR  600
LLKEKLHVWL LQKVREGGRG PSVLDEHGQG VLHFAAALNY DWALLPAVVA GINVNFRDAN  660
GWTALHWAAF FGRERTVAAL ISLGAAPGAL TDPSPKYPHG RTPADLASSN GHKGIAGYLG  720
ESALSAHLES LNFDNKKSKA VDTCGKKAVH TASERVATPP QGNDMHTLSL KDSLAAVSNA  780
TQAAARIHEV MRMQSFQKKQ LLDLSNYQPL SLLPVKRRNS GSHDEHAAAI RIQNKFRCWK  840
GRKDFLIIRQ RIVKIQAHVR GHQVRKNYRS IVWSVGILEK VILRWRRKGS GLRGFKAEAL  900
SEDSSKQNPS VTEDDDDDEF FKKGRKQTEE RLQMALARVK SMVQYPEARD QYRRLLNVVT  960
EMRQTKVKDG VVDNVDETAD FDDLIDIEAL LDEDAFLPNA SSNFSVY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein