PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022929252.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 1011aa MW: 114003 Da PI: 7.444

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022929252.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	163.6	3.4e-51	20	135	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 l+ k+rwl++ ei++iL+n++k+++++e+++ p+sgsl+Ly+rk++ryfrkDG++w+kkk gk+v+E+he+LK g+v vl+cyYah+een++fqr XP_022929252.1 20 LEAKHRWLRPAEICEILKNHDKFSIASEPANMPPSGSLFLYDRKVLRYFRKDGHNWRKKK-GKAVKEAHERLKAGSVYVLQCYYAHGEENENFQR 113 6679**************************************************9887.9***************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Lee+l++ivlvhylev+ XP_022929252.1 114 RTYWMLEEDLSHIVLVHYLEVQ 135 *****************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1011 aa Download sequence
MAESGRHTPG NSIDIEQNLL EAKHRWLRPA EICEILKNHD KFSIASEPAN MPPSGSLFLY 60 DRKVLRYFRK DGHNWRKKKG KAVKEAHERL KAGSVYVLQC YYAHGEENEN FQRRTYWMLE 120 EDLSHIVLVH YLEVQSNRAN FNRIQGTDEA ALFSRESEET TSHSGMDASK SCRFHPSNYQ 180 ILSQTTEISL NSAQASEYED AESEYGNRES NVFHSVLGLQ RSNMESTSRE PCDPNYPAPL 240 SENFTAFGGN CFPTSSDRSK DSNHAESIHE PHKNLCFSSD NVLKSGATGI YSPHLQPSFS 300 TSRPKILDNV PKQGDGIMGL PFSDRCKRED FGNHLLAQED CEATLEGKSK FAKKQPLLNA 360 ITTEALRKSD SFNQWMSREL GDVKEASMQC NSGAHWNSVE NEVGNSSISS QAHLDTYMFS 420 RSLSHEQLFS IIDFSPSWAY EGSEIKVLIS GKFLKRKQEV ENLKWSCMFG EVEVPAEVIA 480 NGVLRCFTPM HKAGRVPFYV TRSNRLACSE VQNFEYRVKC IQDVEVMYDT SITNEALALR 540 FVKLLCLSCS DTLIADPNSS SDRSGFNKVR ELLKVDNSEW DQFMKPRWDE NVSLGSTKEL 600 LLQRLLKEKL HVWLLQKVRE GGRGPSVLDE HGQGVLHFAA ALNYDWALLP AVVAGINVNF 660 RDANGWTALH WAAFFGRERT VAALISLGAA PGALTDPSPK YPHGRTPADL ASSNGHKGIA 720 GYLGESALSA HLESLNFDNK KSKAVDTCGK KAVHTASERV ATPPQGNDMH TLSLKDSLAA 780 VSNATQAAAR IHEVMRMQSF QKKQLLDLSN YQPLSLLPVK RRNSGSHDEH AAAIRIQNKF 840 RCWKGRKDFL IIRQRIVKIQ AHVRGHQVRK NYRSIVWSVG ILEKVILRWR RKGSGLRGFK 900 AEALSEDSSK QNPSVTEDDD DDEFFKKGRK QTEERLQMAL ARVKSMVQYP EARDQYRRLL 960 NVVTEMRQTK VKDGVVDNVD ETADFDDLID IEALLDEDAF LPNASSNFSV Y

Sequence ? help Back to Top

Protein Sequence Length: 1011 aa Download sequence

MAESGRHTPG NSIDIEQNLL EAKHRWLRPA EICEILKNHD KFSIASEPAN MPPSGSLFLY  60
DRKVLRYFRK DGHNWRKKKG KAVKEAHERL KAGSVYVLQC YYAHGEENEN FQRRTYWMLE  120
EDLSHIVLVH YLEVQSNRAN FNRIQGTDEA ALFSRESEET TSHSGMDASK SCRFHPSNYQ  180
ILSQTTEISL NSAQASEYED AESEYGNRES NVFHSVLGLQ RSNMESTSRE PCDPNYPAPL  240
SENFTAFGGN CFPTSSDRSK DSNHAESIHE PHKNLCFSSD NVLKSGATGI YSPHLQPSFS  300
TSRPKILDNV PKQGDGIMGL PFSDRCKRED FGNHLLAQED CEATLEGKSK FAKKQPLLNA  360
ITTEALRKSD SFNQWMSREL GDVKEASMQC NSGAHWNSVE NEVGNSSISS QAHLDTYMFS  420
RSLSHEQLFS IIDFSPSWAY EGSEIKVLIS GKFLKRKQEV ENLKWSCMFG EVEVPAEVIA  480
NGVLRCFTPM HKAGRVPFYV TRSNRLACSE VQNFEYRVKC IQDVEVMYDT SITNEALALR  540
FVKLLCLSCS DTLIADPNSS SDRSGFNKVR ELLKVDNSEW DQFMKPRWDE NVSLGSTKEL  600
LLQRLLKEKL HVWLLQKVRE GGRGPSVLDE HGQGVLHFAA ALNYDWALLP AVVAGINVNF  660
RDANGWTALH WAAFFGRERT VAALISLGAA PGALTDPSPK YPHGRTPADL ASSNGHKGIA  720
GYLGESALSA HLESLNFDNK KSKAVDTCGK KAVHTASERV ATPPQGNDMH TLSLKDSLAA  780
VSNATQAAAR IHEVMRMQSF QKKQLLDLSN YQPLSLLPVK RRNSGSHDEH AAAIRIQNKF  840
RCWKGRKDFL IIRQRIVKIQ AHVRGHQVRK NYRSIVWSVG ILEKVILRWR RKGSGLRGFK  900
AEALSEDSSK QNPSVTEDDD DDEFFKKGRK QTEERLQMAL ARVKSMVQYP EARDQYRRLL  960
NVVTEMRQTK VKDGVVDNVD ETADFDDLID IEALLDEDAF LPNASSNFSV Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein