PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022928619.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 318aa MW: 35331.6 Da PI: 7.1942

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022928619.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.3	2.7e-05	155	174	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ XP_022928619.1 155 FSCPVCFKTFNRYNNMQMHM 174 89*****************9 PP
2	zf-C2H2	14.7	8.8e-05	239	261	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ XP_022928619.1 239 FMCRKCGKAFAVRGDWRTHEKNC 261 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MSHPCSNSLA SVPKFISFHH HSSPSQPSNS SPNMSHNCFS YPYPSSIPSP NPPPPSSPPL 60 REALPLLGLM SPPEQRQEQE EDDDDGGSKD ENASVTVALH IGLPNPSPAE IASLMCGSSS 120 EIDQEHEFGQ STKTLIKGQY WIPTPSQILI GPTQFSCPVC FKTFNRYNNM QMHMWGHGSQ 180 YRKGPESLRG TQPTGMLRLP CYCCAAGCRN NIDHPRAKPL KDFRTLQTHY KRKHGLKPFM 240 CRKCGKAFAV RGDWRTHEKN CGKLWYCICG SDFKHKRSLK DHVKAFGNDH AAYGGGGIDV 300 FGDEDDEPAS EVEQDNDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-129	C2H2 family protein