PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022928596.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NF-YA | ||||||||
Protein Properties | Length: 234aa MW: 26845.2 Da PI: 9.5491 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 96.7 | 2.5e-30 | 139 | 196 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQy++Il+RRq+Rak+e +k++ ++kpylheSRh hA+rR+Rg+ GrF XP_022928596.1 139 EEPVYVNAKQYHGILRRRQSRAKAEVLNKISRSQKKPYLHESRHLHAMRRERGCRGRF 196 69*******************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 234 aa Download sequence |
MMSSKTDYRY HPDGYNFQPS WWLGAPTTIA ISKEDKVNWV WPNGLVDNGP QPNRSTKEVQ 60 ETMTPPPYGE SIVARQSKDA SIVLPLMNNE HYHASTYETT ATSYQYNDVY YGQLMPPFGF 120 QTLHNSEYTR MTLPLAMAEE PVYVNAKQYH GILRRRQSRA KAEVLNKISR SQKKPYLHES 180 RHLHAMRRER GCRGRFVSKK KTVEPIASMA DDGKGSNMSS NCYQGSELHL SAYI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20910.1 | 1e-32 | NF-YA family protein |