PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022928563.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 506aa MW: 55030.6 Da PI: 5.0233

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022928563.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.8	1.4e-11	321	363	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A++Y+k+L XP_022928563.1 321 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIDYLKEL 363 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MLPKSTGILW LDGDHDDVAS WTRATDDHYD DIAIAGSISS FKSMLEPDCF INSSSAPLNS 60 SLHRFNPTDN FLSSCSPSQP FALDPTQSML PSHKSCFSSL LNVVCGSNFD NAYDFGADTA 120 LFGSYQGNQA SNPSVFMGFT GVSPLPQIGN QALSLNHSEF PVADNPPAFG DGFNPAVPFE 180 SFDGCGNALF QNRPKVLRPL EVLPQVGAQP TLFQKRAAHR VVSPGADKLE NLEVSGLKFG 240 EGSTWTADLE NLSKNNGDED GEDDSVDVSR FNYDSDEGNE YNKQEDNVNA KNCGSNSNAN 300 STVTGGDQKG KKKGMPAKNL MAERRRRKKL NDRLYMLRSV VPKISKMDRA SILGDAIDYL 360 KELLQRINDL HNELESTPSG SSLQPSASFH PLTPTLPTLP CRVKEELCPS SSLCSPKNQP 420 ARVEVRVREG RAVNIHMFCS CKPGLLLSTM RALDSLGLDI QQAVISCFNG FALDVFRAEQ 480 SKEGQEIIPE QIKAVLLESA GLHGVM

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MLPKSTGILW LDGDHDDVAS WTRATDDHYD DIAIAGSISS FKSMLEPDCF INSSSAPLNS  60
SLHRFNPTDN FLSSCSPSQP FALDPTQSML PSHKSCFSSL LNVVCGSNFD NAYDFGADTA  120
LFGSYQGNQA SNPSVFMGFT GVSPLPQIGN QALSLNHSEF PVADNPPAFG DGFNPAVPFE  180
SFDGCGNALF QNRPKVLRPL EVLPQVGAQP TLFQKRAAHR VVSPGADKLE NLEVSGLKFG  240
EGSTWTADLE NLSKNNGDED GEDDSVDVSR FNYDSDEGNE YNKQEDNVNA KNCGSNSNAN  300
STVTGGDQKG KKKGMPAKNL MAERRRRKKL NDRLYMLRSV VPKISKMDRA SILGDAIDYL  360
KELLQRINDL HNELESTPSG SSLQPSASFH PLTPTLPTLP CRVKEELCPS SSLCSPKNQP  420
ARVEVRVREG RAVNIHMFCS CKPGLLLSTM RALDSLGLDI QQAVISCFNG FALDVFRAEQ  480
SKEGQEIIPE QIKAVLLESA GLHGVM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	311	329	KKKGMPAKNLMAERRRRKK
2	323	330	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-116	bHLH family protein