PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022928510.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 505aa MW: 56996.2 Da PI: 6.4588

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022928510.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.1	9.7e-09	447	501	1	46
TSSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqk 46 r+rW+teE++ l+++v+++ + W++I + +Rt+ ++k++w++ XP_022928510.1 447 RMRWSTEEEDMLKEGVQRFSSSvnknlPWRKILEFGRhifdDTRTPVDLKDKWRN 501 89****************99*******9999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MRTKSRRGGR SRPSRRSSDS YPSFMASPSV PDRNMPNAED NTLNDGFVSG QDACNAEDNA 60 LNEASRKETH DVLDKEDCFQ KDTCIRCDEG GGLLVCTEIG CPIALHEYCM SCKPSFDEEG 120 RFYCPYCSYK RALVIVNELR RKAMAAKRKL SDFIDNRMVS GANSPQLGEA GKKKVTDVST 180 CGVDVDLPNH ESSRDQEDMQ VGQNQSNQGE DHARTAGDVQ LSTVMGVNSK NHEGPSVSSV 240 SNGIHSTHEV QPCEDAMNED GTHQDESLED KEDGKTMEEE NLRFTDDIED KEIVKDQGQP 300 EIQNDEEEIA VNDVDLGAGR ASQDTGDGAE RIQPENIYPA SGNNDLKNET FVKKKRFKMK 360 ANRKVDRKDF NSPRMSLRRQ TPDHGTKSPH MQTPKREKTS PHIQTPKPGK DRSTKVEKVS 420 TSGKLKMKPS SPNQFKNLMF HGEKRKRMRW STEEEDMLKE GVQRFSSSVN KNLPWRKILE 480 FGRHIFDDTR TPVDLKDKWR NIVDK

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MRTKSRRGGR SRPSRRSSDS YPSFMASPSV PDRNMPNAED NTLNDGFVSG QDACNAEDNA  60
LNEASRKETH DVLDKEDCFQ KDTCIRCDEG GGLLVCTEIG CPIALHEYCM SCKPSFDEEG  120
RFYCPYCSYK RALVIVNELR RKAMAAKRKL SDFIDNRMVS GANSPQLGEA GKKKVTDVST  180
CGVDVDLPNH ESSRDQEDMQ VGQNQSNQGE DHARTAGDVQ LSTVMGVNSK NHEGPSVSSV  240
SNGIHSTHEV QPCEDAMNED GTHQDESLED KEDGKTMEEE NLRFTDDIED KEIVKDQGQP  300
EIQNDEEEIA VNDVDLGAGR ASQDTGDGAE RIQPENIYPA SGNNDLKNET FVKKKRFKMK  360
ANRKVDRKDF NSPRMSLRRQ TPDHGTKSPH MQTPKREKTS PHIQTPKPGK DRSTKVEKVS  420
TSGKLKMKPS SPNQFKNLMF HGEKRKRMRW STEEEDMLKE GVQRFSSSVN KNLPWRKILE  480
FGRHIFDDTR TPVDLKDKWR NIVDK