PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022928502.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TALE

Protein Properties

Length: 318aa MW: 35368.5 Da PI: 4.6995

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022928502.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29	1.8e-09	264	297	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ ++ eLA+++gL+ +q+ +WF N+R ++ XP_022928502.1 264 WPYPTEMDKIELAESTGLDPKQINNWFINQRKRH 297 69*****************************885 PP
2	ELK	39.7	1e-13	217	238	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++LlrKY+gyL+sLkqEFs XP_022928502.1 217 ELKDRLLRKYGGYLSSLKQEFS 238 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MADLYGLHPL ADYSYESSSA APLDNLLVPV NYQAYSTASS DYSHPLQVFG SGHVPSVSSG 60 DYDAALVAVV SEEESAGAIR EKIASHPLYP RLVDAFVDCQ KIGAPPEVAN ILGRSLRGSD 120 IGERTSSVST RLGADPELDE FMETYCGILA KYKLDLSLPF VEASSFLNNM ETQLNRLCNG 180 TTRGYVSDEA AAGSSEEDVS AGEVELQDSL WANEDRELKD RLLRKYGGYL SSLKQEFSKT 240 KKKVKLPKES RQILLDWWNV HCKWPYPTEM DKIELAESTG LDPKQINNWF INQRKRHWKA 300 SENMQFGDVH GVFTADPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-103	TALE family protein