PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022928357.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 790aa MW: 90857.4 Da PI: 6.5375 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 99.4 | 3.7e-31 | 82 | 173 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA++vGFs+r+s+s++s+r+g i++r+fvC keg+r+ ++k+ +++ +r+r++tr+gCka+l vk++++gkw+v+ ++ eHnHel+p XP_022928357.1 82 FYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRtkDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVP 173 9***************************************999888555677889***********************************86 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 790 aa Download sequence |
MDNEVIEFDI GLGGGSGRDG DDYSMAMVHD SMEEEEMIDS SPLSGLGCGA GSGEIYLPDG 60 DLLDLEPHEG MEFESEEAAK AFYNSYARRV GFSTRVSSSR RSRRDGAIIQ RQFVCAKEGF 120 RNMNEKRTKD REIKRPRTVT RVGCKASLSV KMHDSGKWVV SCFVREHNHE LVPPDQVHCL 180 RSHRQISGPA KTLIDTLQAA GMGPRRIMSA LIKEYGGISK VGFTEVDCRN YMRNNRQRSL 240 EGDIQLLLDY LRQMHSENPN FFYAVQGEED QWVGNVFWAD PKAQMNYTYF GDTVTFDTTY 300 RSNRYRLPFA PFTGVNHHGQ PVLFGCAFLI NESEASFNWL FRTWLLAMSG HPPMSITTDH 360 DAVIQSAIAQ VFPETHHRFC KWHIFKKCQE MLSHVFLKHP SFEADFHKCV NLTDSIEEFE 420 SCWLSLVDRY DLRDHEWLQT VYSARRQWVP VYLRNTFFAE MSITQRSDSM NSYFDGYVNA 480 STNLSQFFKL YEKALESRNE KEVKADYDTM NTSPVLKTPS PMEKQVSELY TRKLFSRFQD 540 ELVGTLTFMA SKADDNGEVI TYQVAKFGED HKAHYVKFNV VEMRANCSCQ MFEFSGLLCR 600 HILAVFRVTN VLTLPSHYIL KRWTRNAKSN VILEDHVNDI YNNYLESHTV RYITLRHEAF 660 KFIEEGAKTI DTYNVAKDAL QEAVKRVSHT PRNNSKISSI DERIKADPAN DISYTNHSSS 720 TCQDGSLGIN MSEDDLDKKI NELSNELECA NRKCEVYRSN LFSVLKDIED HKLQLSIKVQ 780 NIKISMKDSI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G38180.1 | 0.0 | FAR1 family protein |