PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022928092.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TALE

Protein Properties

Length: 688aa MW: 75829.4 Da PI: 6.1467

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022928092.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.7	2.3e-09	475	512	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + XP_022928092.1 475 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 512 664559******************************88 PP
2	BELL	124	5.8e-40	335	406	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +r e+q++k+kLls+l+eVd+rY++y+eq+q+v++sFe+v+glg+a Yt+lA+ka+SrhFrcLkdai++q+ XP_022928092.1 335 DRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFEEVMGLGAAVAYTALAQKAMSRHFRCLKDAIVGQL 406 589******************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 688 aa Download sequence
MGIVAHPLQF LFFTIFLQQF QQFHCDSMSQ QDYQQAAAAA AGFFTPFSNG FDRSSTAHQD 60 PQQHYQHIAH QIRKEKLRLQ GFHPPPHPPS LVGIDDDDDD QSAGAAALHH VYDSAGILSE 120 MFNFPPAPPP PPPPPPQTEL YGNREAMNAA DSAVAMQLFL MNPNPRSPSP PPPPPAVSST 180 LHMLLPNPGS GGSFGQFTWG VVPEQETGDH SSSNPNEGRL SLSLSSSLEA AKAEELRMGD 240 SASGLLYQTH HHPQHVHVGI ESSNPLGVVN LLRNSKYVKA AQELLEEFCS VGRGQFKRSK 300 SNLPSNSNSH GGDGAGVSSS AAKDHQPQPA LSAADRIEHQ RRKVKLLSML DEVDRRYNHY 360 CEQMQMVVNS FEEVMGLGAA VAYTALAQKA MSRHFRCLKD AIVGQLKQSC EMLGDKDGGR 420 ASGITKGETP RLKLLEQRLR QQRAFHQMGI MDQEAWRPQR GLPERSVNIL RAWLFEHFLH 480 PYPSDADKHL LARQTGLSRN QVSNWFINAR VRLWKPMVEE MYQQEAKEEE EEDDDDDEDN 540 TDEDTKTNPH QITSNALSQT PTPPSDATPP PPPPPPPPPP SHPPPFSQNQ QYSSQAPPTP 600 SMVANCFPAT HYDSELQDTC RRVSVLTAPD HQFGTTNTSA TSDIQGPTTL IRFGTTTGDV 660 SLTLGLRHAG NIPDKNPSFS LRSEFGDC

Sequence ? help Back to Top

Protein Sequence Length: 688 aa Download sequence

MGIVAHPLQF LFFTIFLQQF QQFHCDSMSQ QDYQQAAAAA AGFFTPFSNG FDRSSTAHQD  60
PQQHYQHIAH QIRKEKLRLQ GFHPPPHPPS LVGIDDDDDD QSAGAAALHH VYDSAGILSE  120
MFNFPPAPPP PPPPPPQTEL YGNREAMNAA DSAVAMQLFL MNPNPRSPSP PPPPPAVSST  180
LHMLLPNPGS GGSFGQFTWG VVPEQETGDH SSSNPNEGRL SLSLSSSLEA AKAEELRMGD  240
SASGLLYQTH HHPQHVHVGI ESSNPLGVVN LLRNSKYVKA AQELLEEFCS VGRGQFKRSK  300
SNLPSNSNSH GGDGAGVSSS AAKDHQPQPA LSAADRIEHQ RRKVKLLSML DEVDRRYNHY  360
CEQMQMVVNS FEEVMGLGAA VAYTALAQKA MSRHFRCLKD AIVGQLKQSC EMLGDKDGGR  420
ASGITKGETP RLKLLEQRLR QQRAFHQMGI MDQEAWRPQR GLPERSVNIL RAWLFEHFLH  480
PYPSDADKHL LARQTGLSRN QVSNWFINAR VRLWKPMVEE MYQQEAKEEE EEDDDDDEDN  540
TDEDTKTNPH QITSNALSQT PTPPSDATPP PPPPPPPPPP SHPPPFSQNQ QYSSQAPPTP  600
SMVANCFPAT HYDSELQDTC RRVSVLTAPD HQFGTTNTSA TSDIQGPTTL IRFGTTTGDV  660
SLTLGLRHAG NIPDKNPSFS LRSEFGDC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-130	TALE family protein