PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022928081.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 287aa    MW: 33153.2 Da    PI: 9.7372
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022928081.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.23.5e-14301091799
                     E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
              B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                      +pkkf+ e+g+k  e+   +++  +g++Wev +  +k++gr+++  GW++Fv+  ++    f+vFk++ r s+f  +v +f+ 
  XP_022928081.1  30 EIPKKFVGEYGLKAFENNPTRVKVADGEEWEVGV--TKSDGRVWFDYGWQKFVEFYNVGLEYFLVFKYELRsSCF--HVVIFDP 109
                     59********9998888899999999********..*********************************666999..9999985 PP
2B360.62.6e-19189285498
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS..SEE..E CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkl.iy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr..sefelv 93 
                     +  ps+  + + l +p++fae h    ee+ +++l+d++gr+W v++ +y   + ++r+ l++GW++F  +n+Lk+ D +vF+++++  ++  ++
  XP_022928081.1 189 KIYPSHIQSGAYLNVPRRFAEMHI---EEGAEMVLQDSDGRTWGVTYySYltPQMKRRVELRSGWRKFFVDNDLKVADCCVFEMIRKnsTTIAFK 280
                     56799999999*********9993...24669***************4448644455699***********************996623333445 PP

                     EEEE- CS
              B3  94 vkvfr 98 
                     v +fr
  XP_022928081.1 281 VDIFR 285
                     55555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MSKFLQQQLP AMASSSQPCK APDNPHFFKE IPKKFVGEYG LKAFENNPTR VKVADGEEWE  60
VGVTKSDGRV WFDYGWQKFV EFYNVGLEYF LVFKYELRSS CFHVVIFDPT ATEIKYPLKK  120
KLNMGTNFDD LHLISHPHPQ VGKASFGAMK LMNNKRKLRS MTRTSERAGA MAKATTFQSM  180
TPNPSFMCKI YPSHIQSGAY LNVPRRFAEM HIEEGAEMVL QDSDGRTWGV TYYSYLTPQM  240
KRRVELRSGW RKFFVDNDLK VADCCVFEMI RKNSTTIAFK VDIFRAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31680.13e-15B3 family protein