PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022927917.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 1090aa MW: 121491 Da PI: 6.0331

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022927917.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	181.2	1.2e-56	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 ++ ++rwl++ ei++iL n+ k+++++e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+++vl+cyYah+een++fqr XP_022927917.1 20 IEARHRWLRPAEICEILRNYPKFHIASEPPERPSSGSLFLFDRKVLRYFRKDGHKWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEENENFQR 114 4569***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Lee+l +iv+vhylevk XP_022927917.1 115 RSYWMLEEHLMHIVFVHYLEVK 136 *****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1090 aa Download sequence
MADRGSYGLA PRLDIDQLLI EARHRWLRPA EICEILRNYP KFHIASEPPE RPSSGSLFLF 60 DRKVLRYFRK DGHKWRKKKD GKTVKEAHEK LKVGSIDVLH CYYAHGEENE NFQRRSYWML 120 EEHLMHIVFV HYLEVKGNRT NIGAVVETDE VSSSSQKSSP MSSSYSSSRN QAAFENADSP 180 SPTSTVTSSY EDADTDTYQE TSRFHSFPTS PLMNNGLLVN KKEAGPSNIY YPHSSSNNIE 240 AWPSAPAVEY VPQVQKDGLG SSDGGTGVIG SQKTLTSASW EEIFQQCTTG FQTVPSQVLN 300 SWIEPLSSGT VLGQENSIPG KLLAGNNAIK EDFKSSLTMA SNCQVPFEDN TSSFSKGHVD 360 QFPDLYSVYD INGKLTEQKS HNATFGSGHA HPSIENKELF SKNFEPQFNE GELYSATRLN 420 SENDISKEGS ISYSLALKQS LVDGEESLKK VDSFSRWVSR ELVEVDDLHM HPSSGLSWST 480 VECGDMVDDS SLSPSLSEDQ LFSITDFSPK STLLDLETEV VIIGKFLGNN HATKCYWSCM 540 FGEVEVPAEV LADGILCCHA PPHSVGQVPF YVTCSNRLAC SEVREFDYLA DSAQDVDVTN 600 VYTAGATEEL HMHLRFERLL STRSSDPPNN LSEGALEKRN LIKKLISIKE EEDCYGEEPN 660 SQNDQNQHQS KESLFVKLMK EKLYSWLIRK VIEDGKGPNI LDDKGQGLIH LAAALGYDWA 720 IRPIVATGVS LNFRDVNGWT AVHWAAFYGR ELTVGTLITL GADPGLPSDP SPGNPSGTTP 780 ADLASVRGQK GIAGFLAESS LTSYISSVSM ADTKKDGVLD ASEGKAVYTA AERKATPIND 840 GFMPGDLSLK DSLTAVCNAT QAADRIHLMF RVKSFQRKQL SERGADEFGY SDDSAISVVA 900 ARARKSRLSN SPDHAAAVHI QKKFRGWKMR KEFLLIRQRI VKIQAIVRGH QVRKQYKKIV 960 WSVGILDKII LRWRRKGSGL RGFRSDTVAK TPPSVVMEPR EEDDEDFLKK GRRQTEERFQ 1020 KALTRVKSMA QYPEGRDQYR RLLTVVQKCR ETKVSNISIT STSEEIIEGD DMIDIDSLLD 1080 DDALMSMTFD

Sequence ? help Back to Top

Protein Sequence Length: 1090 aa Download sequence

MADRGSYGLA PRLDIDQLLI EARHRWLRPA EICEILRNYP KFHIASEPPE RPSSGSLFLF  60
DRKVLRYFRK DGHKWRKKKD GKTVKEAHEK LKVGSIDVLH CYYAHGEENE NFQRRSYWML  120
EEHLMHIVFV HYLEVKGNRT NIGAVVETDE VSSSSQKSSP MSSSYSSSRN QAAFENADSP  180
SPTSTVTSSY EDADTDTYQE TSRFHSFPTS PLMNNGLLVN KKEAGPSNIY YPHSSSNNIE  240
AWPSAPAVEY VPQVQKDGLG SSDGGTGVIG SQKTLTSASW EEIFQQCTTG FQTVPSQVLN  300
SWIEPLSSGT VLGQENSIPG KLLAGNNAIK EDFKSSLTMA SNCQVPFEDN TSSFSKGHVD  360
QFPDLYSVYD INGKLTEQKS HNATFGSGHA HPSIENKELF SKNFEPQFNE GELYSATRLN  420
SENDISKEGS ISYSLALKQS LVDGEESLKK VDSFSRWVSR ELVEVDDLHM HPSSGLSWST  480
VECGDMVDDS SLSPSLSEDQ LFSITDFSPK STLLDLETEV VIIGKFLGNN HATKCYWSCM  540
FGEVEVPAEV LADGILCCHA PPHSVGQVPF YVTCSNRLAC SEVREFDYLA DSAQDVDVTN  600
VYTAGATEEL HMHLRFERLL STRSSDPPNN LSEGALEKRN LIKKLISIKE EEDCYGEEPN  660
SQNDQNQHQS KESLFVKLMK EKLYSWLIRK VIEDGKGPNI LDDKGQGLIH LAAALGYDWA  720
IRPIVATGVS LNFRDVNGWT AVHWAAFYGR ELTVGTLITL GADPGLPSDP SPGNPSGTTP  780
ADLASVRGQK GIAGFLAESS LTSYISSVSM ADTKKDGVLD ASEGKAVYTA AERKATPIND  840
GFMPGDLSLK DSLTAVCNAT QAADRIHLMF RVKSFQRKQL SERGADEFGY SDDSAISVVA  900
ARARKSRLSN SPDHAAAVHI QKKFRGWKMR KEFLLIRQRI VKIQAIVRGH QVRKQYKKIV  960
WSVGILDKII LRWRRKGSGL RGFRSDTVAK TPPSVVMEPR EEDDEDFLKK GRRQTEERFQ  1020
KALTRVKSMA QYPEGRDQYR RLLTVVQKCR ETKVSNISIT STSEEIIEGD DMIDIDSLLD  1080
DDALMSMTFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein