PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022927915.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 1091aa MW: 121620 Da PI: 5.9708

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022927915.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	181.2	1.2e-56	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 ++ ++rwl++ ei++iL n+ k+++++e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+++vl+cyYah+een++fqr XP_022927915.1 20 IEARHRWLRPAEICEILRNYPKFHIASEPPERPSSGSLFLFDRKVLRYFRKDGHKWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEENENFQR 114 4569***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylevk 118 r+yw+Lee+l +iv+vhylevk XP_022927915.1 115 RSYWMLEEHLMHIVFVHYLEVK 136 *****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1091 aa Download sequence
MADRGSYGLA PRLDIDQLLI EARHRWLRPA EICEILRNYP KFHIASEPPE RPSSGSLFLF 60 DRKVLRYFRK DGHKWRKKKD GKTVKEAHEK LKVGSIDVLH CYYAHGEENE NFQRRSYWML 120 EEHLMHIVFV HYLEVKGNRT NIGAVVETDE VSSSSQKSSP MSSSYSSSRN QAAFENADSP 180 SPTSTVTSSY EDADTEDTYQ ETSRFHSFPT SPLMNNGLLV NKKEAGPSNI YYPHSSSNNI 240 EAWPSAPAVE YVPQVQKDGL GSSDGGTGVI GSQKTLTSAS WEEIFQQCTT GFQTVPSQVL 300 NSWIEPLSSG TVLGQENSIP GKLLAGNNAI KEDFKSSLTM ASNCQVPFED NTSSFSKGHV 360 DQFPDLYSVY DINGKLTEQK SHNATFGSGH AHPSIENKEL FSKNFEPQFN EGELYSATRL 420 NSENDISKEG SISYSLALKQ SLVDGEESLK KVDSFSRWVS RELVEVDDLH MHPSSGLSWS 480 TVECGDMVDD SSLSPSLSED QLFSITDFSP KSTLLDLETE VVIIGKFLGN NHATKCYWSC 540 MFGEVEVPAE VLADGILCCH APPHSVGQVP FYVTCSNRLA CSEVREFDYL ADSAQDVDVT 600 NVYTAGATEE LHMHLRFERL LSTRSSDPPN NLSEGALEKR NLIKKLISIK EEEDCYGEEP 660 NSQNDQNQHQ SKESLFVKLM KEKLYSWLIR KVIEDGKGPN ILDDKGQGLI HLAAALGYDW 720 AIRPIVATGV SLNFRDVNGW TAVHWAAFYG RELTVGTLIT LGADPGLPSD PSPGNPSGTT 780 PADLASVRGQ KGIAGFLAES SLTSYISSVS MADTKKDGVL DASEGKAVYT AAERKATPIN 840 DGFMPGDLSL KDSLTAVCNA TQAADRIHLM FRVKSFQRKQ LSERGADEFG YSDDSAISVV 900 AARARKSRLS NSPDHAAAVH IQKKFRGWKM RKEFLLIRQR IVKIQAIVRG HQVRKQYKKI 960 VWSVGILDKI ILRWRRKGSG LRGFRSDTVA KTPPSVVMEP REEDDEDFLK KGRRQTEERF 1020 QKALTRVKSM AQYPEGRDQY RRLLTVVQKC RETKVSNISI TSTSEEIIEG DDMIDIDSLL 1080 DDDALMSMTF D

Sequence ? help Back to Top

Protein Sequence Length: 1091 aa Download sequence

MADRGSYGLA PRLDIDQLLI EARHRWLRPA EICEILRNYP KFHIASEPPE RPSSGSLFLF  60
DRKVLRYFRK DGHKWRKKKD GKTVKEAHEK LKVGSIDVLH CYYAHGEENE NFQRRSYWML  120
EEHLMHIVFV HYLEVKGNRT NIGAVVETDE VSSSSQKSSP MSSSYSSSRN QAAFENADSP  180
SPTSTVTSSY EDADTEDTYQ ETSRFHSFPT SPLMNNGLLV NKKEAGPSNI YYPHSSSNNI  240
EAWPSAPAVE YVPQVQKDGL GSSDGGTGVI GSQKTLTSAS WEEIFQQCTT GFQTVPSQVL  300
NSWIEPLSSG TVLGQENSIP GKLLAGNNAI KEDFKSSLTM ASNCQVPFED NTSSFSKGHV  360
DQFPDLYSVY DINGKLTEQK SHNATFGSGH AHPSIENKEL FSKNFEPQFN EGELYSATRL  420
NSENDISKEG SISYSLALKQ SLVDGEESLK KVDSFSRWVS RELVEVDDLH MHPSSGLSWS  480
TVECGDMVDD SSLSPSLSED QLFSITDFSP KSTLLDLETE VVIIGKFLGN NHATKCYWSC  540
MFGEVEVPAE VLADGILCCH APPHSVGQVP FYVTCSNRLA CSEVREFDYL ADSAQDVDVT  600
NVYTAGATEE LHMHLRFERL LSTRSSDPPN NLSEGALEKR NLIKKLISIK EEEDCYGEEP  660
NSQNDQNQHQ SKESLFVKLM KEKLYSWLIR KVIEDGKGPN ILDDKGQGLI HLAAALGYDW  720
AIRPIVATGV SLNFRDVNGW TAVHWAAFYG RELTVGTLIT LGADPGLPSD PSPGNPSGTT  780
PADLASVRGQ KGIAGFLAES SLTSYISSVS MADTKKDGVL DASEGKAVYT AAERKATPIN  840
DGFMPGDLSL KDSLTAVCNA TQAADRIHLM FRVKSFQRKQ LSERGADEFG YSDDSAISVV  900
AARARKSRLS NSPDHAAAVH IQKKFRGWKM RKEFLLIRQR IVKIQAIVRG HQVRKQYKKI  960
VWSVGILDKI ILRWRRKGSG LRGFRSDTVA KTPPSVVMEP REEDDEDFLK KGRRQTEERF  1020
QKALTRVKSM AQYPEGRDQY RRLLTVVQKC RETKVSNISI TSTSEEIIEG DDMIDIDSLL  1080
DDDALMSMTF D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein