PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022927585.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Dof

Protein Properties

Length: 343aa MW: 37862.7 Da PI: 8.0283

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022927585.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.3	7.8e-39	70	128	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++ l+cprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+ XP_022927585.1 70 QDPLRCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRL 128 67899****************************************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MLGNCDKMVL ISSSANQWPQ MNNHHPTSLD HDHHHHHHQK GLNNLMPSSS SGLVMDKQHD 60 QKTQLKQHQQ DPLRCPRCDS SNTKFCYYNN YSLSQPRHFC KACKRYWTRG GTLRNVPVGG 120 GCRKNKRLKR PSSTTTTMTT TTTTTTTTTA AVTSPAPDST SSSSTSCPNM FYASTSDLNV 180 PFSGYDLNPL GLGFCSPNID HRDFNLNGFN SSSLLSGYST LFPHNPSSST SISSLLASKF 240 TNGVGFKSTD PNLFGNNLAG FGHHHQQQVD HVMGSNGGDQ LGLNVKDVKL EDGMKRLNWD 300 DQQNQTDEIA TQSNDHNPLY GNWSSQTWHD PENLASSITS SLI

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MLGNCDKMVL ISSSANQWPQ MNNHHPTSLD HDHHHHHHQK GLNNLMPSSS SGLVMDKQHD  60
QKTQLKQHQQ DPLRCPRCDS SNTKFCYYNN YSLSQPRHFC KACKRYWTRG GTLRNVPVGG  120
GCRKNKRLKR PSSTTTTMTT TTTTTTTTTA AVTSPAPDST SSSSTSCPNM FYASTSDLNV  180
PFSGYDLNPL GLGFCSPNID HRDFNLNGFN SSSLLSGYST LFPHNPSSST SISSLLASKF  240
TNGVGFKSTD PNLFGNNLAG FGHHHQQQVD HVMGSNGGDQ LGLNVKDVKL EDGMKRLNWD  300
DQQNQTDEIA TQSNDHNPLY GNWSSQTWHD PENLASSITS SLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.2	3e-34	Dof family protein