PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022927582.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | LFY | ||||||||
Protein Properties | Length: 368aa MW: 41865.4 Da PI: 7.386 | ||||||||
Description | LFY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FLO_LFY | 176.1 | 3e-54 | 1 | 149 | 1 | 152 |
FLO_LFY 1 mdpeafsaslfkwdpraaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslse 95 mdpea+sa+lfkwdpr ++ a +++ + + l +leelf+ayG+ry+t+akiaelGftvstL+dmkdeel+d+++sls+ XP_022927582.1 1 MDPEALSATLFKWDPRGMVGGGGGAS-LPAPLPP----YSLRPRELGLGGLEELFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMINSLSH 90 9***************9885544333.2332333....33556677799********************************************** PP FLO_LFY 96 ifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeet..aldalsqeglsee 152 ifr++llvGeryGikaavraerrr+++e ++++rr+l+s+d+++ +ldalsqeg+ e XP_022927582.1 91 IFRWELLVGERYGIKAAVRAERRRVDDEMDSSRRRHLFSNDTHNnvVLDALSQEGTWEA 149 *****************************9********9998887799*******8775 PP | |||||||
2 | FLO_LFY | 412.7 | 4.1e-126 | 155 | 356 | 184 | 386 |
FLO_LFY 184 ekkkaskkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcP 278 +kk++k ++ kkk+ +++eed+++e+ee ee+ + + +erqrehPfivtepgevargkknGLDYLf+LyeqCrefL+qvq+iakerGekcP XP_022927582.1 155 MRKKQRK-RNGSKKKQVMVMEEDHHDETEEGGGEEEDNMEVSERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCP 248 3333322.2222333333344555555556666677777889***************************************************** PP FLO_LFY 279 tkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtk 373 tkvtnqvfryakk+gasyinkPkmrhYvhCYalhcLdeeasnalrr fkergenvGawrqacykplva aa+qgwdida+fnahprL+iWYvPtk XP_022927582.1 249 TKVTNQVFRYAKKVGASYINKPKMRHYVHCYALHCLDEEASNALRRVFKERGENVGAWRQACYKPLVATAASQGWDIDAIFNAHPRLAIWYVPTK 343 *********************************************************************************************** PP FLO_LFY 374 LrqLChlerskas 386 LrqLCh+er++a+ XP_022927582.1 344 LRQLCHAERNSAK 356 *********9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 368 aa Download sequence |
MDPEALSATL FKWDPRGMVG GGGGASLPAP LPPYSLRPRE LGLGGLEELF QAYGIRYYTA 60 AKIAELGFTV STLLDMKDEE LEDMINSLSH IFRWELLVGE RYGIKAAVRA ERRRVDDEMD 120 SSRRRHLFSN DTHNNVVLDA LSQEGTWEAV AAGEMRKKQR KRNGSKKKQV MVMEEDHHDE 180 TEEGGGEEED NMEVSERQRE HPFIVTEPGE VARGKKNGLD YLFHLYEQCR EFLIQVQNIA 240 KERGEKCPTK VTNQVFRYAK KVGASYINKP KMRHYVHCYA LHCLDEEASN ALRRVFKERG 300 ENVGAWRQAC YKPLVATAAS QGWDIDAIFN AHPRLAIWYV PTKLRQLCHA ERNSAKASTS 360 AAVNHLPF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 156 | 162 | RKKQRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61850.1 | 1e-109 | LFY family protein |