PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022927573.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family LFY
Protein Properties Length: 387aa    MW: 43733.4 Da    PI: 6.8424
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022927573.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY6298.1e-19213751386
         FLO_LFY   1 mdpeafsaslfkwdpraaaaapparlleeaavseapleaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslse 95 
                     mdpea+sa+lfkwdpr ++          a +++     +    +  l +leelf+ayG+ry+t+akiaelGftvstL+dmkdeel+d+++sls+
  XP_022927573.1   1 MDPEALSATLFKWDPRGMVGGGGGAS-LPAPLPP----YSLRPRELGLGGLEELFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMINSLSH 90 
                     9***************9885544333.2332333....33556677799********************************************** PP

         FLO_LFY  96 ifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeet..aldalsqeglseepvqeekeaagsggeglgeaelvaaeekkseeekkka 188
                     ifr++llvGeryGikaavraerrr+++e ++++rr+l+s+d+++  +ldalsqeglseepvq+eke +gsgg+g  ++e+vaa e +++++k++ 
  XP_022927573.1  91 IFRWELLVGERYGIKAAVRAERRRVDDEMDSSRRRHLFSNDTHNnvVLDALSQEGLSEEPVQQEKEVVGSGGGG--TWEAVAAGEMRKKQRKRNG 183
                     *****************************9********9998887799**********************9999..9999999853332222222 PP

         FLO_LFY 189 skkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkiakerGekcPtkvtn 283
                         +k+k  + +++eed+++e+ee   ee+ + + +erqrehPfivtepgevargkknGLDYLf+LyeqCrefL+qvq+iakerGekcPtkvtn
  XP_022927573.1 184 ----SKKK--QVMVMEEDHHDETEEGGGEEEDNMEVSERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVTN 272
                     ....2222..233344555555666666777777889********************************************************** PP

         FLO_LFY 284 qvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkLrqLC 378
                     qvfryakk+gasyinkPkmrhYvhCYalhcLdeeasnalrr fkergenvGawrqacykplva aa+qgwdida+fnahprL+iWYvPtkLrqLC
  XP_022927573.1 273 QVFRYAKKVGASYINKPKMRHYVHCYALHCLDEEASNALRRVFKERGENVGAWRQACYKPLVATAASQGWDIDAIFNAHPRLAIWYVPTKLRQLC 367
                     *********************************************************************************************** PP

         FLO_LFY 379 hlerskas 386
                     h+er++a+
  XP_022927573.1 368 HAERNSAK 375
                     ****9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    
MDPEALSATL FKWDPRGMVG GGGGASLPAP LPPYSLRPRE LGLGGLEELF QAYGIRYYTA  60
AKIAELGFTV STLLDMKDEE LEDMINSLSH IFRWELLVGE RYGIKAAVRA ERRRVDDEMD  120
SSRRRHLFSN DTHNNVVLDA LSQEGLSEEP VQQEKEVVGS GGGGTWEAVA AGEMRKKQRK  180
RNGSKKKQVM VMEEDHHDET EEGGGEEEDN MEVSERQREH PFIVTEPGEV ARGKKNGLDY  240
LFHLYEQCRE FLIQVQNIAK ERGEKCPTKV TNQVFRYAKK VGASYINKPK MRHYVHCYAL  300
HCLDEEASNA LRRVFKERGE NVGAWRQACY KPLVATAASQ GWDIDAIFNA HPRLAIWYVP  360
TKLRQLCHAE RNSAKASTSA AVNHLPF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175181RKKQRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-144LFY family protein