PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022927111.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 303aa    MW: 33746.9 Da    PI: 4.464
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022927111.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.81.7e-07182226655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      ++ r RR++i  + +eL el+P        K++ ae+L  A +Y+k Lq
  XP_022927111.1 182 TIAARERRRKITAKTQELGELVPGG-----SKMNTAEMLSSAFKYVKFLQ 226
                     56789******************95.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MAALSFYSNF SSDPSSYHHQ FHPFSPEISP ELFHLPPPQL LPDPAFDYLH AAVDHSVFFP  60
TATAPFFDDV SPFVFSDVYP YFPTPAVDSF VPVSAEFFPC DEFEFYCPKR QRVVMEQSFC  120
YGGGGGNVGG DGGYFPLPEF FSDQWDGRLG NAELMNKGDC LKGTLTPAPL PAPSSNNLSA  180
QTIAARERRR KITAKTQELG ELVPGGSKMN TAEMLSSAFK YVKFLQAQVA ILQVKQETEQ  240
EQERTETEDL QILESTMIQE KLYAEEKCLV PKGFVQNLVN SPEIQSNPSI LNSINQILHM  300
NSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30670.11e-27bHLH family protein