PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022926974.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 281aa    MW: 31538 Da    PI: 5.5182
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022926974.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.3e-20122172255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrd      k +r++lg+f taeeAa a+++a+++++g
  XP_022926974.1 122 HYRGVRRRP-WGKYAAEIRDS---SrKGARVWLGTFNTAEEAALAYDKAALRIRG 172
                     8********.**********3...2234*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MATIQQDKSE AILENVWANF IGENGLDGHG GGTRRGSGFN KSWTELPSLC CGDGSMEVLE  60
RLPSLGRWIS MGADAWEELL HGIVPASNTH QSFHDNLESS PVHHSGFVVD STRVETVVAT  120
KHYRGVRRRP WGKYAAEIRD SSRKGARVWL GTFNTAEEAA LAYDKAALRI RGPKAHLNFP  180
VDTVVEAMGM HSSTNIDHLD NLMPSFQEHD SASYSQLGSH ESLSIIGKRT TREWEDNLNF  240
NDMEFEHPTV KRKTNMFYND FDVFEFQDLG SDYLDNLMSS L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18450.11e-37ERF family protein