PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022926973.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WOX

Protein Properties

Length: 388aa MW: 41955.1 Da PI: 7.3264

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022926973.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.4	1e-17	58	117	2	56
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 ++R+++++eq+++Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k XP_022926973.1 58 KPRWNPKPEQIRILEAIFNSgMVNPPRDEIRKIRAQLqeygQVGDANVFYWFQNRKSRSK 117 89***************99***********************************98 PP
2	Wus_type_Homeobox	111.3	5.2e-36	57	119	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R++ k XP_022926973.1 57 PKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKSK 119 689**********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MASSNRHWPS MFKSKPCNSH HQWQHDINPN LSSSTATCLR SAPYATVGGC EERSPEPKPR 60 WNPKPEQIRI LEAIFNSGMV NPPRDEIRKI RAQLQEYGQV GDANVFYWFQ NRKSRSKSKL 120 RHIQNSKSNN NHNSQTTTAP LPSPIPPIAT ATITTAAAAA TTCSSSSSSD KSSPISAPIK 180 TFSSNSMTQN YLPQLTNELM PEPFFFPVSQ TGGGGSGGSS NLSQGFCLSE LCSVVQQVPE 240 DGVVGPCTSL LLSEIMNPTE ASKKDLDEDK ITVKLPPPFM NYHPVFTPST DNILPPTTIS 300 TALTTLPPPS HTIHQGVGEV YGLGQSCVGK STVFINGVAF EVGSGAFNVR EAFGDEAVLL 360 HSSGQPVLTN EWGLTLHSLQ HGASYYLI

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MASSNRHWPS MFKSKPCNSH HQWQHDINPN LSSSTATCLR SAPYATVGGC EERSPEPKPR  60
WNPKPEQIRI LEAIFNSGMV NPPRDEIRKI RAQLQEYGQV GDANVFYWFQ NRKSRSKSKL  120
RHIQNSKSNN NHNSQTTTAP LPSPIPPIAT ATITTAAAAA TTCSSSSSSD KSSPISAPIK  180
TFSSNSMTQN YLPQLTNELM PEPFFFPVSQ TGGGGSGGSS NLSQGFCLSE LCSVVQQVPE  240
DGVVGPCTSL LLSEIMNPTE ASKKDLDEDK ITVKLPPPFM NYHPVFTPST DNILPPTTIS  300
TALTTLPPPS HTIHQGVGEV YGLGQSCVGK STVFINGVAF EVGSGAFNVR EAFGDEAVLL  360
HSSGQPVLTN EWGLTLHSLQ HGASYYLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	1e-60	WOX family protein