PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022926947.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HB-other

Protein Properties

Length: 1734aa MW: 196490 Da PI: 4.7649

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022926947.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.8	2.1e-19	30	86	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 r kR+ t+ qle+Le++F+ + yps+++r+eL++klgLt+rq ++WF+ rR k+kk XP_022926947.1 30 RPKRQMKTPFQLETLEKAFALETYPSESTRAELSEKLGLTDRQLQMWFCHRRLKDKK 86 579****************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1734 aa Download sequence
MEAAASDGGN HNLNNDNINK ISNSSEGLSR PKRQMKTPFQ LETLEKAFAL ETYPSESTRA 60 ELSEKLGLTD RQLQMWFCHR RLKDKKEPAK KPRNVVPALP DSPIDELRVV AEPGSDYASG 120 SGSGSSPFGD VGLRNVASGS GGEDMPMTRR YYEPSRSIME LRAIACVESQ LGEPLREDGP 180 IIGIEFDSLP PDAFGAPLVA EQQKRSGHLY GDKYDQRDAK SNKATARAFP EYSFMPDQSR 240 IRADAYGPVA QSHYPDSLVE VSAARTPSFL LGREQLNRSH NYHGQVSRVR LLSQQEQQGV 300 AVPSPADDNT FVPASIRNPI VAQEDSYMLP DGQVFPNDVI IRMERKRKSE EARLNKEAEA 360 HEIRMRKELE KQDNLRKKSE ERMRKEMEKQ DRERRKEEER LQREKQREVE RLKREERREL 420 ERREKFLQRE YLKAEKRRQK EAIRKEKEAV RRKAAIEKAT ARRIARESME LIEDEQLELM 480 EIAAANKGLS SILSLDHDTL QNLESFRDYL GAFPPKSVQL KKPFSIQPWI NSEENIGNLL 540 MVWRFFITFS DVLELWPFTL DEFVQALHDY DSRLLGEIHI CLLRLIVKDI EDVARTPSAG 600 LGMNQIGVAN TGGGHPQIVE GAYAWGFDIC NWQKHLNPLT WPEIFRQLAL SAGFGPQLKR 660 SLAWSEMRSN DEAKCGEDVV STLRNGSAAE NAFSIMQEKG LLAPRRSRHR LTPGTVKFAA 720 FHVLSLEGSE GLTVLELAEK IQRSGLRDLS TSRTPEASIS VALTRDTKLF ERIAPSTYRV 780 RAPYRKDPDD AEDLLSVARK KIQVFQNGFL AGEDADDVER DEESECDDVD EDPEVDDGAT 840 TSLMNEDVSK GDANLRVENE NSCHDIDGNP QNEIAKNIPS SPLSGSKDTK YLNIPTEQHA 900 AVDGTTVTDL DQENMEIDES KEGESWIQGL TEGEYHDLSV EERLNALIAL TSIANEGNSI 960 RLVLEDRLEA ANAVKKQMLA EAQIDKSRLK EEIITKSDFP IHIVSKVETE LNGSAMEDGQ 1020 SPFPVADNQN NETTLCTAEN LGSVPNERAT LVPDFFPVPD NFLAQQCGHA SKRSRSQLKS 1080 YIAHRAEEMY TYRSLPLGRD RRRNRYWQFV ASSSSNDPGS GRIFVEMYDG KWMLIDSEEG 1140 FDALSMALDT RGVRESHLRI MLQMIETSFK ENVRRNLQCV NVMVQSRITP KNENDESSSS 1200 PDCNASFNSP SSTVCGLNLD TTITSSSFRI ELGRNENEKK AAFKRYQDLQ RWMLRECFST 1260 STLCAMEFGE KRCTPLLDIC DSCLCLFDSQ HSHCSSCHQT YGTSENDTNF LEHECHCTRE 1320 RKSYHWDTHA LDASLPLKSR LLKALLAFIE VHVPSEAFQL FWTEHRKDWG VRMKLSSTIE 1380 ELLQILTLFE SVIKRDFLKS DFTTTDEHLS SCSISRNVIH DAADIGSVLT LPWIPRTSAA 1440 VALRLCEIDV SIYYIGCEKP EPDQYKEIGE HVNFPSRFVQ IKNENELDYD GLMKQENLAD 1500 PKSLRNSYKR GGRRSRDHGR RKRWQKKVNG SKPSRVRPNV KSNEKMNEEQ RELGQGMQVL 1560 GVRGPRTVRK RRAENSIPDE GLLGLVPSSS TQNIDESPKD YIGEWEDEKM DRFVDMEDDE 1620 NVMEDGENEE DEENVNNVEP MDSDEDAQEV GYEQGSWEYG IDNGTSNRWN GDLGVASDEE 1680 DVELSEDYNG TEEGGNDFGE EELDDDTSVE SDCSPNRIGN NGGRESPVSD DYSD

Sequence ? help Back to Top

Protein Sequence Length: 1734 aa Download sequence

MEAAASDGGN HNLNNDNINK ISNSSEGLSR PKRQMKTPFQ LETLEKAFAL ETYPSESTRA  60
ELSEKLGLTD RQLQMWFCHR RLKDKKEPAK KPRNVVPALP DSPIDELRVV AEPGSDYASG  120
SGSGSSPFGD VGLRNVASGS GGEDMPMTRR YYEPSRSIME LRAIACVESQ LGEPLREDGP  180
IIGIEFDSLP PDAFGAPLVA EQQKRSGHLY GDKYDQRDAK SNKATARAFP EYSFMPDQSR  240
IRADAYGPVA QSHYPDSLVE VSAARTPSFL LGREQLNRSH NYHGQVSRVR LLSQQEQQGV  300
AVPSPADDNT FVPASIRNPI VAQEDSYMLP DGQVFPNDVI IRMERKRKSE EARLNKEAEA  360
HEIRMRKELE KQDNLRKKSE ERMRKEMEKQ DRERRKEEER LQREKQREVE RLKREERREL  420
ERREKFLQRE YLKAEKRRQK EAIRKEKEAV RRKAAIEKAT ARRIARESME LIEDEQLELM  480
EIAAANKGLS SILSLDHDTL QNLESFRDYL GAFPPKSVQL KKPFSIQPWI NSEENIGNLL  540
MVWRFFITFS DVLELWPFTL DEFVQALHDY DSRLLGEIHI CLLRLIVKDI EDVARTPSAG  600
LGMNQIGVAN TGGGHPQIVE GAYAWGFDIC NWQKHLNPLT WPEIFRQLAL SAGFGPQLKR  660
SLAWSEMRSN DEAKCGEDVV STLRNGSAAE NAFSIMQEKG LLAPRRSRHR LTPGTVKFAA  720
FHVLSLEGSE GLTVLELAEK IQRSGLRDLS TSRTPEASIS VALTRDTKLF ERIAPSTYRV  780
RAPYRKDPDD AEDLLSVARK KIQVFQNGFL AGEDADDVER DEESECDDVD EDPEVDDGAT  840
TSLMNEDVSK GDANLRVENE NSCHDIDGNP QNEIAKNIPS SPLSGSKDTK YLNIPTEQHA  900
AVDGTTVTDL DQENMEIDES KEGESWIQGL TEGEYHDLSV EERLNALIAL TSIANEGNSI  960
RLVLEDRLEA ANAVKKQMLA EAQIDKSRLK EEIITKSDFP IHIVSKVETE LNGSAMEDGQ  1020
SPFPVADNQN NETTLCTAEN LGSVPNERAT LVPDFFPVPD NFLAQQCGHA SKRSRSQLKS  1080
YIAHRAEEMY TYRSLPLGRD RRRNRYWQFV ASSSSNDPGS GRIFVEMYDG KWMLIDSEEG  1140
FDALSMALDT RGVRESHLRI MLQMIETSFK ENVRRNLQCV NVMVQSRITP KNENDESSSS  1200
PDCNASFNSP SSTVCGLNLD TTITSSSFRI ELGRNENEKK AAFKRYQDLQ RWMLRECFST  1260
STLCAMEFGE KRCTPLLDIC DSCLCLFDSQ HSHCSSCHQT YGTSENDTNF LEHECHCTRE  1320
RKSYHWDTHA LDASLPLKSR LLKALLAFIE VHVPSEAFQL FWTEHRKDWG VRMKLSSTIE  1380
ELLQILTLFE SVIKRDFLKS DFTTTDEHLS SCSISRNVIH DAADIGSVLT LPWIPRTSAA  1440
VALRLCEIDV SIYYIGCEKP EPDQYKEIGE HVNFPSRFVQ IKNENELDYD GLMKQENLAD  1500
PKSLRNSYKR GGRRSRDHGR RKRWQKKVNG SKPSRVRPNV KSNEKMNEEQ RELGQGMQVL  1560
GVRGPRTVRK RRAENSIPDE GLLGLVPSSS TQNIDESPKD YIGEWEDEKM DRFVDMEDDE  1620
NVMEDGENEE DEENVNNVEP MDSDEDAQEV GYEQGSWEYG IDNGTSNRWN GDLGVASDEE  1680
DVELSEDYNG TEEGGNDFGE EELDDDTSVE SDCSPNRIGN NGGRESPVSD DYSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	80	87	RRLKDKKE
2	432	438	LKAEKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein