PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022926891.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | TALE | ||||||||
Protein Properties | Length: 361aa MW: 40414.4 Da PI: 6.7036 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 29.1 | 1.7e-09 | 290 | 323 | 22 | 55 |
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yps++++ LA+++gL+++q+ +WF N+R ++ XP_022926891.1 290 WPYPSESQKLALAQSTGLDQKQINNWFINQRKRH 323 69*****************************885 PP | |||||||
2 | ELK | 41.1 | 3.6e-14 | 243 | 264 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlrKYsg+LgsLkqEF+ XP_022926891.1 243 ELKGQLLRKYSGCLGSLKQEFM 264 9********************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 361 aa Download sequence |
MDGPGGSSSG MMNFGDQNNS NNGLCSSMMM MMPLMSSHHH HHHHQGDACN PFPPLPSPNY 60 TTNNINNTNT SSSSNPICYF MDEHTTTTTT NNNNDNGCCN ANSSSCELKA KIMGHPHYHR 120 LLAAYVNCRK VGAPPDVVAR LEGACASALT ISGTSCTGCI GEDPALDQFM EAYCEMLTKY 180 EQELSKPFRD AMLFLHRIEC QFKALSISSS DAVCGEAFER NGSSEEEVDI NGHSIDPQAE 240 DRELKGQLLR KYSGCLGSLK QEFMKKRKKG KLPKEARQQL LDWWSRHYKW PYPSESQKLA 300 LAQSTGLDQK QINNWFINQR KRHWKPSEDM QFVVMDGGHP QYYMDTVLGN PFPLDISPTL 360 L |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 259 | 268 | LKQEFMKKRK |
2 | 265 | 269 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G62360.1 | 1e-131 | TALE family protein |