PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022926867.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 266aa    MW: 29300.2 Da    PI: 6.8627
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022926867.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA96.52.9e-30168224158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     ++p+ VNaKQyq+Il+RRq+Rak+e+ekk  +k+rkpylheSRh+hA+rR RgsgGrF
  XP_022926867.1 168 QDPVLVNAKQYQGILRRRQARAKAEAEKKS-IKARKPYLHESRHQHAIRRTRGSGGRF 224
                     589**************************9.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MQSKSETNNQ FESDPNGTPS TSIYYEPWWR GIGYNPIPLP MVGGNASSST SLEFPNGGSE  60
SNDGQSVSNN DVNDEEDVSK EVQATGSPHS AGNYRQAAQK MQHVSSTFPV MHGECLMQST  120
QLELACASNP YQDPSYGGMM AFYGHQPLGY PMVGMPHARM PLPIEIAQDP VLVNAKQYQG  180
ILRRRQARAK AEAEKKSIKA RKPYLHESRH QHAIRRTRGS GGRFTKKNEA DDGKEMHSDE  240
VNENGRHLND GSKQQNGSSL TNMASD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.13e-51NF-YA family protein