PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022926860.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 271aa    MW: 29793.8 Da    PI: 6.9179
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022926860.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA96.53e-30173229158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     ++p+ VNaKQyq+Il+RRq+Rak+e+ekk  +k+rkpylheSRh+hA+rR RgsgGrF
  XP_022926860.1 173 QDPVLVNAKQYQGILRRRQARAKAEAEKKS-IKARKPYLHESRHQHAIRRTRGSGGRF 229
                     589**************************9.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MQSKSETNNQ FESDPNGTPS TSIYYEPWWR GIGYNPIPLP MVGGNASSST SLEFPNGGSE  60
SNDGQSVSNN DVNDEEDVSK EVQATGSPHS AGNYRQAAQK MQHVSSTFPV MHGECLMQST  120
QLELVGHSIA CASNPYQDPS YGGMMAFYGH QPLGYPMVGM PHARMPLPIE IAQDPVLVNA  180
KQYQGILRRR QARAKAEAEK KSIKARKPYL HESRHQHAIR RTRGSGGRFT KKNEADDGKE  240
MHSDEVNENG RHLNDGSKQQ NGSSLTNMAS D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.18e-55NF-YA family protein