PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022926713.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | DBB | ||||||||
Protein Properties | Length: 313aa MW: 34363.6 Da PI: 7.0215 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 26 | 1.9e-08 | 3 | 43 | 4 | 38 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 +C+ +++ e++ fC ++ lC+ C l+ H+ H+ XP_022926713.1 3 IRCDVCDQAEASVFCSADEAALCHGCDLHVHRAnklagkHS 43 58*****************************7666666665 PP | |||||||
2 | zf-B_box | 28.8 | 2.6e-09 | 56 | 95 | 4 | 37 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg.......H 37 + C+ ++e ++ fC++++ lC++C ++H g H XP_022926713.1 56 PLCDICQERRALVFCQQDRAILCRECDISIH-GtnertqkH 95 78*****************************.435566666 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 313 aa Download sequence |
MKIRCDVCDQ AEASVFCSAD EAALCHGCDL HVHRANKLAG KHSRFSLLQP IKIDSPLCDI 60 CQERRALVFC QQDRAILCRE CDISIHGTNE RTQKHNRFLL TGVKLSSTSF SYQTSSSSNG 120 YNAAMDVKTR SSHACSKSPK MAAHETSSSP SSEKAAPSTS NYKVEDGQAS DGGSFSTSSI 180 SEYLETLPGW CVEEFLDPST AAANRFCKFN GEILATGNQN LERQQESLGI ERFGNTLEFV 240 GKFSQTGFWN GVGISMKTCR GEKMAVADKI ISNFCSENNS GKIKKQTETN FLFVAADLHV 300 LPYSHSLDCH FIC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G39070.1 | 2e-58 | DBB family protein |