PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022926689.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

FAR1

Protein Properties

Length: 753aa MW: 86699.1 Da PI: 6.8087

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022926689.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	85.5	8.5e-27	28	114	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YAk++GF + k +s++s+ ++e+++++f C+++g++++++++ ++r++ ++gCka+++vk++++gkw+v++++++HnHel p XP_022926689.1 28 SFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQSDDA----INPRPSPKIGCKASMHVKRKQNGKWYVYSFVKDHNHELLP 114 5**************************************999877....9**********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 753 aa Download sequence
MDSNAIVCSS MTEPCPGMEF ESHENAYSFY RDYAKTMGFG TAKLSSRRSR ASKEFIDAKF 60 SCTRYGNKQQ SDDAINPRPS PKIGCKASMH VKRKQNGKWY VYSFVKDHNH ELLPSQVHLF 120 RSHRNTDLLK NDVRIRRRKN LAAMSKMFSA YQNVDCLESY VKNQHDKGRT LVLESGDAQI 180 LLELFMHMQE ENPKFFYAVD LNEGHQFRNV FWVDGKGMED YVRFGDVVSF DTTYFTNKYK 240 LPLVFFIGVN HHIQPTLLGC ALIADETVNT FSWLIQTWYI AMGERAPQVM LTDQNTNIKA 300 VIEAVLPGTR HYFCLWYILQ KIPKNLEFLS MWHEGFMEEF KNCVFKSWTK EQFEKRWQKL 360 LDGFSLREVE WMQYLYDDRA YWVPSFARDV SFAGLCTSSR MESLNSFFDK YVKIETSLTE 420 FIERYKDILE DRYEEEAKAN FDAWHDTPEL KSPSPFEKQV SLVYTHEIFK KFQMEVLGAA 480 ACHLKKETED ATTTTYTVKD IEDGQNYVVE CSHSNSDIYC SCRLFEYKGF LCRHAIIVLQ 540 MSGVFSIPSK YVLQRWTNTA TSRNPINEKL DEVQCKVRRF NDLCRRAIIL GEEGSLSQES 600 YDIALSAINE ALKQCATVSR SNSAENDGRP DNSGILVFGI EEDNQCSSSL AVENSPDLKV 660 INAKKNPKRA GSSKEPAANE ISKNGKVSQP LDANAGSQDD FNQLELSDMR PIQLHGISPT 720 QLHNMVPTLL HNVTPTQFHS MSSAHLHESL HPR

Sequence ? help Back to Top

Protein Sequence Length: 753 aa Download sequence

MDSNAIVCSS MTEPCPGMEF ESHENAYSFY RDYAKTMGFG TAKLSSRRSR ASKEFIDAKF  60
SCTRYGNKQQ SDDAINPRPS PKIGCKASMH VKRKQNGKWY VYSFVKDHNH ELLPSQVHLF  120
RSHRNTDLLK NDVRIRRRKN LAAMSKMFSA YQNVDCLESY VKNQHDKGRT LVLESGDAQI  180
LLELFMHMQE ENPKFFYAVD LNEGHQFRNV FWVDGKGMED YVRFGDVVSF DTTYFTNKYK  240
LPLVFFIGVN HHIQPTLLGC ALIADETVNT FSWLIQTWYI AMGERAPQVM LTDQNTNIKA  300
VIEAVLPGTR HYFCLWYILQ KIPKNLEFLS MWHEGFMEEF KNCVFKSWTK EQFEKRWQKL  360
LDGFSLREVE WMQYLYDDRA YWVPSFARDV SFAGLCTSSR MESLNSFFDK YVKIETSLTE  420
FIERYKDILE DRYEEEAKAN FDAWHDTPEL KSPSPFEKQV SLVYTHEIFK KFQMEVLGAA  480
ACHLKKETED ATTTTYTVKD IEDGQNYVVE CSHSNSDIYC SCRLFEYKGF LCRHAIIVLQ  540
MSGVFSIPSK YVLQRWTNTA TSRNPINEKL DEVQCKVRRF NDLCRRAIIL GEEGSLSQES  600
YDIALSAINE ALKQCATVSR SNSAENDGRP DNSGILVFGI EEDNQCSSSL AVENSPDLKV  660
INAKKNPKRA GSSKEPAANE ISKNGKVSQP LDANAGSQDD FNQLELSDMR PIQLHGISPT  720
QLHNMVPTLL HNVTPTQFHS MSSAHLHESL HPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.1	0.0	FAR1 family protein