PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022926688.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 753aa MW: 86699.1 Da PI: 6.8087 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 85.5 | 8.5e-27 | 28 | 114 | 1 | 91 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YAk++GF + k +s++s+ ++e+++++f C+++g++++++++ ++r++ ++gCka+++vk++++gkw+v++++++HnHel p XP_022926688.1 28 SFYRDYAKTMGFGTAKLSSRRSRASKEFIDAKFSCTRYGNKQQSDDA----INPRPSPKIGCKASMHVKRKQNGKWYVYSFVKDHNHELLP 114 5****************************************999877....9************************************975 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 753 aa Download sequence |
MDSNAIVCSS MTEPCPGMEF ESHENAYSFY RDYAKTMGFG TAKLSSRRSR ASKEFIDAKF 60 SCTRYGNKQQ SDDAINPRPS PKIGCKASMH VKRKQNGKWY VYSFVKDHNH ELLPSQVHLF 120 RSHRNTDLLK NDVRIRRRKN LAAMSKMFSA YQNVDCLESY VKNQHDKGRT LVLESGDAQI 180 LLELFMHMQE ENPKFFYAVD LNEGHQFRNV FWVDGKGMED YVRFGDVVSF DTTYFTNKYK 240 LPLVFFIGVN HHIQPTLLGC ALIADETVNT FSWLIQTWYI AMGERAPQVM LTDQNTNIKA 300 VIEAVLPGTR HYFCLWYILQ KIPKNLEFLS MWHEGFMEEF KNCVFKSWTK EQFEKRWQKL 360 LDGFSLREVE WMQYLYDDRA YWVPSFARDV SFAGLCTSSR MESLNSFFDK YVKIETSLTE 420 FIERYKDILE DRYEEEAKAN FDAWHDTPEL KSPSPFEKQV SLVYTHEIFK KFQMEVLGAA 480 ACHLKKETED ATTTTYTVKD IEDGQNYVVE CSHSNSDIYC SCRLFEYKGF LCRHAIIVLQ 540 MSGVFSIPSK YVLQRWTNTA TSRNPINEKL DEVQCKVRRF NDLCRRAIIL GEEGSLSQES 600 YDIALSAINE ALKQCATVSR SNSAENDGRP DNSGILVFGI EEDNQCSSSL AVENSPDLKV 660 INAKKNPKRA GSSKEPAANE ISKNGKVSQP LDANAGSQDD FNQLELSDMR PIQLHGISPT 720 QLHNMVPTLL HNVTPTQFHS MSSAHLHESL HPR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G76320.1 | 0.0 | FAR1 family protein |