PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022926649.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Dof
Protein Properties Length: 222aa    MW: 24669.1 Da    PI: 9.4769
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022926649.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.81.2e-3898155259
          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 
                     +ek+++cprC+s++tkfCy+nny+++qPr+fCk+C+ryWt+GGalrnvP+G+grr+ k
  XP_022926649.1  98 PEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAK 155
                     68999**************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MGCGLQNGDP TFCHPHRTEP TKPNQTKPTK QNKTKQNKTK TLSRSLSVSS YMAEVHCSNT  60
GGIKLFGTVI TLQTRSIKEE PEKGGDGGGG DQPEMKRPEK IIPCPRCKSM DTKFCYFNNY  120
NVNQPRHFCK GCQRYWTAGG ALRNVPIGAG RRRAKPPLPN CRILSGELPE DYGQLYDAAS  180
GIIHQLELDA VEGWHLTVAE QDFAQVFPLK RQKIIGQHGQ TS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29160.15e-50Dof family protein