PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022926520.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 326aa MW: 38588.2 Da PI: 7.1677 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.2 | 2.2e-28 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRr+g++KK +ELSvLCda++a+i+fss+gkl+ey+s XP_022926520.1 10 RIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCS 59 8***********************************************96 PP | |||||||
2 | K-box | 55.4 | 2.7e-19 | 85 | 172 | 12 | 99 |
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++ e+l++ l+ ++k +++Lq ++ ++ edL++ +l++L ++e++L++sl+++R++K+e+l++q+e+l++kek+l++en+++ + ++ XP_022926520.1 85 NDPEELERLLRIMRKDTDELQLSLQRYTAEDLSTFQLRDLDEIENRLQTSLNRVRARKSEVLHQQVENLRRKEKMLEDENEQIYHLIK 172 5567777888899********************************************************************9988766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 326 aa Download sequence |
MGRGKIAIRR IENRTTRQVT FSKRRAGLFK KTHELSVLCD AQIALIVFSS NGKLFEYCSQ 60 ATCMDQIIRR YQIAIGNPIP DQNMNDPEEL ERLLRIMRKD TDELQLSLQR YTAEDLSTFQ 120 LRDLDEIENR LQTSLNRVRA RKSEVLHQQV ENLRRKEKML EDENEQIYHL IKEQQMAMEQ 180 QQDVAAAMMM QKRRSEEEEM RIRRPEDHQH QHQNHQHQHQ NHQHQNHQHQ HQNHHHHHHH 240 HPHHHPHHGV DQDQAVVCME GDDDDHGNAF GFSNPHIIHP HLQLQLHPHE PNSVLQLGGP 300 LPPPPPPFLH PYRLQPFQPN LHSSTT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23260.2 | 7e-51 | MIKC_MADS family protein |