PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022926519.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 327aa MW: 38675.3 Da PI: 7.1677 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.2 | 2.2e-28 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRr+g++KK +ELSvLCda++a+i+fss+gkl+ey+s XP_022926519.1 10 RIENRTTRQVTFSKRRAGLFKKTHELSVLCDAQIALIVFSSNGKLFEYCS 59 8***********************************************96 PP | |||||||
2 | K-box | 55.4 | 2.7e-19 | 86 | 173 | 12 | 99 |
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++ e+l++ l+ ++k +++Lq ++ ++ edL++ +l++L ++e++L++sl+++R++K+e+l++q+e+l++kek+l++en+++ + ++ XP_022926519.1 86 NDPEELERLLRIMRKDTDELQLSLQRYTAEDLSTFQLRDLDEIENRLQTSLNRVRARKSEVLHQQVENLRRKEKMLEDENEQIYHLIK 173 5567777888899********************************************************************9988766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 327 aa Download sequence |
MGRGKIAIRR IENRTTRQVT FSKRRAGLFK KTHELSVLCD AQIALIVFSS NGKLFEYCSQ 60 ATCSMDQIIR RYQIAIGNPI PDQNMNDPEE LERLLRIMRK DTDELQLSLQ RYTAEDLSTF 120 QLRDLDEIEN RLQTSLNRVR ARKSEVLHQQ VENLRRKEKM LEDENEQIYH LIKEQQMAME 180 QQQDVAAAMM MQKRRSEEEE MRIRRPEDHQ HQHQNHQHQH QNHQHQNHQH QHQNHHHHHH 240 HHPHHHPHHG VDQDQAVVCM EGDDDDHGNA FGFSNPHIIH PHLQLQLHPH EPNSVLQLGG 300 PLPPPPPPFL HPYRLQPFQP NLHSSTT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23260.2 | 2e-49 | MIKC_MADS family protein |