PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022926500.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 836aa MW: 92469.2 Da PI: 7.1714

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022926500.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.4	1.3e-18	280	379	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k l+ sd+++ grlvlpkk+ae++ +++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++ + e++ XP_022926500.1 280 FEKMLSASDAGRIGRLVLPKKCAEAYfpSISQPEGLPLKVQDAKGKEWIFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDIVTFSRLE-PEGK 372 89************************666677788***********99899999999.*******************766.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_022926500.1 373 LVMGFRK 379 7777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 836 aa Download sequence
MSSAVTAASS SSSSLSTKPC YNSDCKELRP DRSRKGWRLR TGDFAELCDR CASAYEEGRF 60 CETFHLNASG WRCCESCGKR VHCGCIVSAH AFTLLDPGGI ECMTCARKNV ILPLNPVWPP 120 SLLFHSALPD RLKDLSVKNW SQLAGSGPVP WRQAPRGINC EDKPSSCSSI PQQSSFVKED 180 TCTTQYGLNV PYAPPNEPST RSRMSGTHLR PTPPSPLPKQ VHTNLQNGAD PSSETQLRNG 240 RPRGDSRGRN YLLPRYWPRF TDQELQQISV DSNSVITPLF EKMLSASDAG RIGRLVLPKK 300 CAEAYFPSIS QPEGLPLKVQ DAKGKEWIFQ FRFWPNNNSR MYVLEGVTPC IQSMQLQAGD 360 IVTFSRLEPE GKLVMGFRKA STAADQENET NKTKNGAPAH GDVSNIKVKA ELADPNSWTK 420 VDKSGYIAKE VLGVKPSISR KRKNSTLGSK SKRLRIENED MIELKITWEE AQGLLRPPPN 480 QLPNIVVIEG FEFEEYEDAP VLGKPTIMPP DNTCERIQWI QCEDCLKWRK LPASALLPSK 540 WICSDNSWDP ERSFCSAAQE LSTEKLEELL SPSNSAAVQK MKAAKLEPDN VEALEGLDTL 600 ANLAILEEGE ASQAPGQATT KHPRHRPGCS CIVCIQPPSG KGPKHKQTCT CNVCLTVKRR 660 FRTLMLRREK KQSEKEAETT RQRHQFQDEM FLDRSMDDES LTFCNTGPSK LIVEGKITDG 720 SDEDPNRNKP STSPFKGQID LNMQPEREEE LSPGSDSGSM MKVLQDTGDR FLEQQRSNSG 780 GAGSSSSDPL EPGGEREHRV ENSSNVIDLG SSNLDADKDH PGTLSFNASA SMSATG

Sequence ? help Back to Top

Protein Sequence Length: 836 aa Download sequence

MSSAVTAASS SSSSLSTKPC YNSDCKELRP DRSRKGWRLR TGDFAELCDR CASAYEEGRF  60
CETFHLNASG WRCCESCGKR VHCGCIVSAH AFTLLDPGGI ECMTCARKNV ILPLNPVWPP  120
SLLFHSALPD RLKDLSVKNW SQLAGSGPVP WRQAPRGINC EDKPSSCSSI PQQSSFVKED  180
TCTTQYGLNV PYAPPNEPST RSRMSGTHLR PTPPSPLPKQ VHTNLQNGAD PSSETQLRNG  240
RPRGDSRGRN YLLPRYWPRF TDQELQQISV DSNSVITPLF EKMLSASDAG RIGRLVLPKK  300
CAEAYFPSIS QPEGLPLKVQ DAKGKEWIFQ FRFWPNNNSR MYVLEGVTPC IQSMQLQAGD  360
IVTFSRLEPE GKLVMGFRKA STAADQENET NKTKNGAPAH GDVSNIKVKA ELADPNSWTK  420
VDKSGYIAKE VLGVKPSISR KRKNSTLGSK SKRLRIENED MIELKITWEE AQGLLRPPPN  480
QLPNIVVIEG FEFEEYEDAP VLGKPTIMPP DNTCERIQWI QCEDCLKWRK LPASALLPSK  540
WICSDNSWDP ERSFCSAAQE LSTEKLEELL SPSNSAAVQK MKAAKLEPDN VEALEGLDTL  600
ANLAILEEGE ASQAPGQATT KHPRHRPGCS CIVCIQPPSG KGPKHKQTCT CNVCLTVKRR  660
FRTLMLRREK KQSEKEAETT RQRHQFQDEM FLDRSMDDES LTFCNTGPSK LIVEGKITDG  720
SDEDPNRNKP STSPFKGQID LNMQPEREEE LSPGSDSGSM MKVLQDTGDR FLEQQRSNSG  780
GAGSSSSDPL EPGGEREHRV ENSSNVIDLG SSNLDADKDH PGTLSFNASA SMSATG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein