PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022926476.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C3H | ||||||||
Protein Properties | Length: 717aa MW: 78962.8 Da PI: 7.0447 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 22.1 | 2.6e-07 | 194 | 214 | 4 | 25 |
---SGGGGTS--TTTTT-SS-S CS zf-CCCH 4 elCrffartGtCkyGdrCkFaH 25 ++C+f+a+ G+C G++C+F H XP_022926476.1 194 AICDFYAK-GWCIKGSSCSFLH 214 68******.************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 717 aa Download sequence |
MDAKRHDKHL RSDTITTTGN SEVKKLSSVG ETESNGNIEF ARLSGEPLTK LVEQSHGECT 60 KVESRKCPKD KETEDQELTV GDKDVEALRN NLPKDSGGSI YNSKVPLCNR GIINAKVSNG 120 LSVTVEDSDI GLENHLVGGN NGSTNPERES TQTDMQLENG KNQMASRSAA SKKRTRKLSP 180 GADVNIEQKR PAAAICDFYA KGWCIKGSSC SFLHIKDNAH ASDQHSEEHA GAVYLKKQVQ 240 PNQAGLQYSA DASKSPVFHH PPNSSLLKDS SLSLKFGISS ERTLSRDFTE SKGWDVLHEK 300 NKFLLHQRED SLLREHPDCQ KLPSTGFDVS FPLNREGSTA RNDQPPEFGP SSGGFAKLSV 360 MEEPANVACP RLLNDYHSPV LRSSLNSNTT LTKGGILSSR FTTSNDSFPF TPSSSASFFG 420 AQKMSIIDGE HRVSMPASSF MRSSPFSPSE SDNSLINASM NSSDYKTKYS CDDWEPSEPF 480 RPSFFIPSIN TASQYDPFLD SIELPRKVGG CHNPWSSKPE FNDDTSSLSS HNKAEDKNEK 540 AGHVQGTDSL MLEAEIQGSS GIDGCNGSRT REDDQIGLIR EKNVPKKMKT DTDGEIKLSN 600 IALHEKESEA ESDRQLGDMD GKHLIDGNVH KESKATRHFR SALIELVKAI LRPKWREGHL 660 KKDVHNTVVK KTLDKVLGTL QPFQVPTTVE SVKQYLSSSR PKIEKLVEGY VSKYGKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33835.1 | 4e-32 | C3H family protein |