PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022926476.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 717aa    MW: 78962.8 Da    PI: 7.0447
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022926476.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.12.6e-07194214425
                     ---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaH 25 
                     ++C+f+a+ G+C  G++C+F H
  XP_022926476.1 194 AICDFYAK-GWCIKGSSCSFLH 214
                     68******.************* PP

Sequence ? help Back to Top
Protein Sequence    Length: 717 aa     Download sequence    
MDAKRHDKHL RSDTITTTGN SEVKKLSSVG ETESNGNIEF ARLSGEPLTK LVEQSHGECT  60
KVESRKCPKD KETEDQELTV GDKDVEALRN NLPKDSGGSI YNSKVPLCNR GIINAKVSNG  120
LSVTVEDSDI GLENHLVGGN NGSTNPERES TQTDMQLENG KNQMASRSAA SKKRTRKLSP  180
GADVNIEQKR PAAAICDFYA KGWCIKGSSC SFLHIKDNAH ASDQHSEEHA GAVYLKKQVQ  240
PNQAGLQYSA DASKSPVFHH PPNSSLLKDS SLSLKFGISS ERTLSRDFTE SKGWDVLHEK  300
NKFLLHQRED SLLREHPDCQ KLPSTGFDVS FPLNREGSTA RNDQPPEFGP SSGGFAKLSV  360
MEEPANVACP RLLNDYHSPV LRSSLNSNTT LTKGGILSSR FTTSNDSFPF TPSSSASFFG  420
AQKMSIIDGE HRVSMPASSF MRSSPFSPSE SDNSLINASM NSSDYKTKYS CDDWEPSEPF  480
RPSFFIPSIN TASQYDPFLD SIELPRKVGG CHNPWSSKPE FNDDTSSLSS HNKAEDKNEK  540
AGHVQGTDSL MLEAEIQGSS GIDGCNGSRT REDDQIGLIR EKNVPKKMKT DTDGEIKLSN  600
IALHEKESEA ESDRQLGDMD GKHLIDGNVH KESKATRHFR SALIELVKAI LRPKWREGHL  660
KKDVHNTVVK KTLDKVLGTL QPFQVPTTVE SVKQYLSSSR PKIEKLVEGY VSKYGKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33835.14e-32C3H family protein