PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022926472.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C3H | ||||||||
Protein Properties | Length: 746aa MW: 82304.6 Da PI: 7.0619 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 22.1 | 2.7e-07 | 223 | 243 | 4 | 25 |
---SGGGGTS--TTTTT-SS-S CS zf-CCCH 4 elCrffartGtCkyGdrCkFaH 25 ++C+f+a+ G+C G++C+F H XP_022926472.1 223 AICDFYAK-GWCIKGSSCSFLH 243 68******.************* PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 746 aa Download sequence |
MRGIFIELES RGHAQVPRKN VYLVDVCNDM DAKRHDKHLR SDTITTTGNS EVKKLSSVGE 60 TESNGNIEFA RLSGEPLTKL VEQSHGECTK VESRKCPKDK ETEDQELTVG DKDVEALRNN 120 LPKDSGGSIY NSKVPLCNRG IINAKVSNGL SVTVEDSDIG LENHLVGGNN GSTNPEREST 180 QTDMQLENGK NQMASRSAAS KKRTRKLSPG ADVNIEQKRP AAAICDFYAK GWCIKGSSCS 240 FLHIKDNAHA SDQHSEEHAG AVYLKKQVQP NQAGLQYSAD ASKSPVFHHP PNSSLLKDSS 300 LSLKFGISSE RTLSRDFTES KGWDVLHEKN KFLLHQREDS LLREHPDCQK LPSTGFDVSF 360 PLNREGSTAR NDQPPEFGPS SGGFAKLSVM EEPANVACPR LLNDYHSPVL RSSLNSNTTL 420 TKGGILSSRF TTSNDSFPFT PSSSASFFGA QKMSIIDGEH RVSMPASSFM RSSPFSPSES 480 DNSLINASMN SSDYKTKYSC DDWEPSEPFR PSFFIPSINT ASQYDPFLDS IELPRKVGGC 540 HNPWSSKPEF NDDTSSLSSH NKAEDKNEKA GHVQGTDSLM LEAEIQGSSG IDGCNGSRTR 600 EDDQIGLIRE KNVPKKMKTD TDGEIKLSNI ALHEKESEAE SDRQLGDMDG KHLIDGNVHK 660 ESKATRHFRS ALIELVKAIL RPKWREGHLK KDVHNTVVKK TLDKVLGTLQ PFQVPTTVES 720 VKQYLSSSRP KIEKLVEGYV SKYGKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33835.1 | 5e-32 | C3H family protein |